id: gomodel:6796b94c00000168
title: transcription elongation by RNA polymerase II (GO:0006368) (incomplete)
taxon: NCBITaxon:4896
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      reference: PMID:19328067
      provenances:
      - contributor:
        - https://orcid.org/0000-0001-6330-7526
        date: '2025-02-22'
        provided_by:
        - http://www.pombase.org
    - term: ECO:0000318
      reference: GO_REF:0000033
      with_objects:
      - PANTHER:PTN000624096
      - RGD:621124
      - UniProtKB:C9K505
      - PomBase:SPBC19F8.07
      - FB:FBgn0263237
      provenances:
      - contributor:
        - https://orcid.org/0000-0001-6330-7526
        date: '2025-02-22'
        provided_by:
        - http://www.pombase.org
    provenances:
    - contributor:
      - https://orcid.org/0000-0001-6330-7526
      date: '2025-02-22'
      provided_by:
      - http://www.pombase.org
    term: PomBase:SPBC19F8.07
  molecular_function:
    type: MolecularFunctionAssociation
    term: GO:0004693
  occurs_in:
    type: CellularAnatomicalEntityAssociation
    evidence:
    - term: ECO:0000314
      reference: PMID:20605454
      provenances:
      - contributor:
        - https://orcid.org/0000-0001-6330-7526
        date: '2025-02-22'
        provided_by:
        - http://www.pombase.org
    provenances:
    - contributor:
      - https://orcid.org/0000-0001-6330-7526
      date: '2025-02-22'
      provided_by:
      - http://www.pombase.org
    term: GO:0000785
  part_of:
    type: BiologicalProcessAssociation
    evidence:
    - term: ECO:0000269
      reference: PMID:19328067
      provenances:
      - contributor:
        - https://orcid.org/0000-0001-6330-7526
        date: '2025-02-22'
        provided_by:
        - http://www.pombase.org
    provenances:
    - contributor:
      - https://orcid.org/0000-0001-6330-7526
      date: '2025-02-22'
      provided_by:
      - http://www.pombase.org
    term: GO:0032968
  causal_associations:
  - type: CausalAssociation
    evidence:
    - term: ECO:0000314
      reference: PMID:15829570
      provenances:
      - contributor:
        - https://orcid.org/0000-0001-6330-7526
        date: '2025-02-22'
        provided_by:
        - http://www.pombase.org
    - term: ECO:0000314
      reference: PMID:8557037
      provenances:
      - contributor:
        - https://orcid.org/0000-0001-6330-7526
        date: '2025-02-22'
        provided_by:
        - http://www.pombase.org
    - term: ECO:0000314
      reference: PMID:8557036
      provenances:
      - contributor:
        - https://orcid.org/0000-0001-6330-7526
        date: '2025-02-22'
        provided_by:
        - http://www.pombase.org
    - term: ECO:0000269
      reference: PMID:19328067
      provenances:
      - contributor:
        - https://orcid.org/0000-0001-6330-7526
        date: '2025-02-22'
        provided_by:
        - http://www.pombase.org
    - term: ECO:0000318
      reference: GO_REF:0000033
      with_objects:
      - PANTHER:PTN000624096
      - RGD:621124
      - UniProtKB:C9K505
      - PomBase:SPBC19F8.07
      - FB:FBgn0263237
      provenances:
      - contributor:
        - https://orcid.org/0000-0001-6330-7526
        date: '2025-02-22'
        provided_by:
        - http://www.pombase.org
    - term: ECO:0000314
      reference: PMID:15829570
      provenances:
      - contributor:
        - https://orcid.org/0000-0001-6330-7526
        date: '2025-02-22'
        provided_by:
        - http://www.pombase.org
    - term: ECO:0000314
      reference: PMID:8557037
      provenances:
      - contributor:
        - https://orcid.org/0000-0001-6330-7526
        date: '2025-02-22'
        provided_by:
        - http://www.pombase.org
    - term: ECO:0000314
      reference: PMID:8557036
      provenances:
      - contributor:
        - https://orcid.org/0000-0001-6330-7526
        date: '2025-02-22'
        provided_by:
        - http://www.pombase.org
    provenances:
    - contributor:
      - https://orcid.org/0000-0001-6330-7526
      date: '2025-02-22'
      provided_by:
      - http://www.pombase.org
    predicate: RO:0002629
    downstream_activity: gomodel:6796b94c00000168/67b1629100002508
  - type: CausalAssociation
    evidence:
    - term: ECO:0000269
      reference: PMID:19328067
      provenances:
      - contributor:
        - https://orcid.org/0000-0001-6330-7526
        date: '2025-02-22'
        provided_by:
        - http://www.pombase.org
    - term: ECO:0000318
      reference: GO_REF:0000033
      with_objects:
      - PANTHER:PTN000624096
      - RGD:621124
      - UniProtKB:C9K505
      - PomBase:SPBC19F8.07
      - FB:FBgn0263237
      provenances:
      - contributor:
        - https://orcid.org/0000-0001-6330-7526
        date: '2025-02-22'
        provided_by:
        - http://www.pombase.org
    provenances:
    - contributor:
      - https://orcid.org/0000-0001-6330-7526
      date: '2025-02-22'
      provided_by:
      - http://www.pombase.org
    predicate: RO:0002629
    downstream_activity: gomodel:6796b94c00000168/67b1629100002508
- id: gomodel:6796b94c00000168/67b1629100002508
  enabled_by:
    type: EnabledByProteinComplexAssociation
    evidence:
    - term: ECO:0000269
      reference: PMID:19460865
      provenances:
      - contributor:
        - https://orcid.org/0000-0001-6330-7526
        date: '2025-02-22'
        provided_by:
        - http://www.pombase.org
    provenances:
    - contributor:
      - https://orcid.org/0000-0001-6330-7526
      date: '2025-02-22'
      provided_by:
      - http://www.pombase.org
    term: GO:0032044
    members:
    - PomBase:SPAC23C4.19
    - PomBase:SPBC21C3.16c
  molecular_function:
    type: MolecularFunctionAssociation
    term: GO:0003711
objects:
- id: GO:0003711
  label: transcription elongation factor activity
  type: gocam:Object
- id: GO:0032044
  label: DSIF complex
  type: gocam:Object
- id: PomBase:SPAC23C4.19
  label: spt5 Spom
  type: gocam:Object
- id: PomBase:SPBC21C3.16c
  label: spt4 Spom
  type: gocam:Object
- id: ECO:0000269
  label: experimental evidence used in manual assertion
  type: gocam:Object
- id: ECO:0000314
  label: direct assay evidence used in manual assertion
  type: gocam:Object
- id: GO:0004693
  label: cyclin-dependent protein serine/threonine kinase activity
  type: gocam:Object
- id: PomBase:SPBC19F8.07
  label: mcs6 Spom
  type: gocam:Object
- id: GO:0032968
  label: positive regulation of transcription elongation by RNA polymerase II
  type: gocam:Object
- id: GO:0000785
  label: chromatin
  type: gocam:Object
- id: ECO:0000318
  label: biological aspect of ancestor evidence used in manual assertion
  type: gocam:Object
- id: GO:0006368
  label: transcription elongation by RNA polymerase II
  type: gocam:Object
- id: PomBase:SPBC28F2.12
  label: rpb1 Spom
  type: gocam:Object
- id: PR:000044737
  label: rpb1/PhosCTD-S5 Spom
  type: gocam:Object
- id: GO:0140463
  label: chromatin-protein adaptor activity
  type: gocam:Object
- id: ECO:0000304
  label: author statement supported by traceable reference used in manual assertion
  type: gocam:Object
- id: PomBase:SPBC32H8.10
  label: cdk9 Spom
  type: gocam:Object
- id: GO:0070691
  label: P-TEFb complex
  type: gocam:Object
- id: ECO:0000315
  label: mutant phenotype evidence used in manual assertion
  type: gocam:Object
- id: ECO:0000353
  label: physical interaction evidence used in manual assertion
  type: gocam:Object
- id: GO:0140836
  label: RNA polymerase II CTD heptapeptide repeat S5 kinase activity
  type: gocam:Object
- id: GO:0070985
  label: transcription factor TFIIK complex
  type: gocam:Object
- id: GO:0000511
  label: H2A-H2B histone complex chaperone activity
  type: gocam:Object
- id: PomBase:SPBC609.05
  label: pob3 Spom
  type: gocam:Object
- id: GO:0140673
  label: transcription elongation-coupled chromatin remodeling
  type: gocam:Object
- id: GO:0035101
  label: FACT complex
  type: gocam:Object
- id: PomBase:SPBP8B7.19
  label: spt16 Spom
  type: gocam:Object
- id: ECO:0000305
  label: curator inference used in manual assertion
  type: gocam:Object
- id: GO:0061575
  label: cyclin-dependent protein serine/threonine kinase activator activity
  type: gocam:Object
- id: PomBase:SPBC32F12.06
  label: pch1 Spom
  type: gocam:Object
- id: GO:0032786
  label: positive regulation of DNA-templated transcription, elongation
  type: gocam:Object
- id: GO:0140834
  label: RNA polymerase II CTD heptapeptide repeat S2 kinase activity
  type: gocam:Object
- id: PomBase:SPAC2F3.15
  label: lsk1 Spom
  type: gocam:Object
- id: GO:0070692
  label: CTDK-1 complex
  type: gocam:Object
- id: PR:000044738
  label: rpb1/PhosCTD-S2 Spom
  type: gocam:Object
- id: PomBase:SPBC530.13
  label: lsc1 Spom
  type: gocam:Object
provenances:
- contributor:
  - https://orcid.org/0000-0001-6330-7526
  date: '2025-02-25'
  provided_by:
  - http://www.pombase.org
