## This file contains the Ensembl configuration tidied up for processing into ## JBrowse configuration [ENSEMBL_INTERNAL_BIGWIG_SOURCES] NRhind_01_all_P_bw = transcriptome NRhind_02_all_N_bw = transcriptome NRhind_03_ds_P_bw = transcriptome NRhind_04_ds_N_bw = transcriptome NRhind_05_hs_P_bw = transcriptome NRhind_06_hs_N_bw = transcriptome NRhind_07_log_P_bw = transcriptome NRhind_08_log_N_bw = transcriptome NRhind_09_plat_P_bw = transcriptome NRhind_10_plat_N_bw = transcriptome JMatapolyAplus = polya_sites JMatapolyAminus = polya_sites MSchlackow_01_ac_P = polya_sites MSchlackow_02_ac_N = polya_sites MSchlackow_03_assc_P = polya_sites MSchlackow_04_assc_N = polya_sites MSchlackow_05_nssc_P = polya_sites MSchlackow_06_nssc_N = polya_sites MSchlackow_07_ma_P = polya_sites MSchlackow_08_ma_N = polya_sites MSchlackow_09_qa24_P = polya_sites MSchlackow_10_qa24_N = polya_sites MSchlackow_11_qa7_P = polya_sites MSchlackow_12_qa7_N = polya_sites MSchlackow_13_ssc_P = polya_sites MSchlackow_14_ssc_N = polya_sites GSE24360_01 = chromatin_binding GSE24360_02 = chromatin_binding GSE24360_03 = chromatin_binding GSE24360_04 = chromatin_binding GSE24360_05 = chromatin_binding GSE24360_06 = chromatin_binding GSE24360_07 = chromatin_binding GSE24360_08 = chromatin_binding GSE24360_09 = chromatin_binding GSE24360_10 = chromatin_binding GSE24360_11 = chromatin_binding GSE24360_12 = chromatin_binding GSE24360_13 = chromatin_binding GSE24360_14 = chromatin_binding GSE24360_15 = chromatin_binding GSE24360_16 = chromatin_binding GSE24360_17 = chromatin_binding GSE24360_18 = chromatin_binding GSE24360_19 = chromatin_binding GSE24360_20 = chromatin_binding GSE24360_21 = chromatin_binding GSE24360_22 = chromatin_binding GSE24360_23 = chromatin_binding GSE24360_24 = chromatin_binding GSE24360_25 = chromatin_binding GSE24360_26 = chromatin_binding GSE24360_27 = chromatin_binding GSE24360_28 = chromatin_binding GSE24360_29 = chromatin_binding NRhind_01_WT = replication_profiling NRhind_02_cdc25 = replication_profiling NRhind_03_dfp1 = replication_profiling GSE41773_01_GSM1024003 = nucleosome GSE41773_02_GSM1024004 = nucleosome GSE41773_03_GSM1024000 = nucleosome GSE41773_04_GSM1024001 = nucleosome GSE41773_05_GSM1024002 = nucleosome GSE41773_06_GSM1023946 = nucleosome GSE41773_07_GSM1023948 = nucleosome GSE41773_08_GSM1023947 = nucleosome GSE41773_09_GSM1023953_N = transcriptome GSE41773_10_GSM1023953_P = transcriptome GSE41773_11_GSM1023952_N = transcriptome GSE41773_12_GSM1023952_P = transcriptome GSE41773_13_GSM1023949_N = transcriptome GSE41773_14_GSM1023949_P = transcriptome GSE41773_15_GSM1023950_N = transcriptome GSE41773_16_GSM1023950_P = transcriptome GSE41773_17_GSM1023951_N = transcriptome GSE41773_18_GSM1023951_P = transcriptome GSE41773_19_GSM1023954_N = transcriptome GSE41773_20_GSM1023954_P = transcriptome GSE41773_21_GSM1023955_N = transcriptome GSE41773_22_GSM1023955_P = transcriptome ERS146817 = transcriptome ERS146818 = transcriptome ERS146819 = transcriptome ERS146820 = transcriptome ERS146821 = transcriptome ERS146822 = transcriptome ERS146823 = transcriptome ERS146824 = transcriptome ERS078438 = transcriptome ERS078439 = transcriptome ERS078440 = transcriptome ERS078441 = transcriptome ERS078442 = transcriptome ERS078443 = transcriptome ERS078444 = transcriptome ERS078445 = transcriptome ERS078446 = transcriptome ERS078447 = transcriptome ERS078448 = transcriptome ERS078449 = transcriptome ERS078450 = transcriptome ERS078451 = transcriptome ERS078452 = transcriptome ERS078453 = transcriptome ERS078454 = transcriptome ERS078455 = transcriptome ERS078456 = transcriptome ERS078457 = transcriptome ERS078458 = transcriptome ERS078459 = transcriptome ERS078460 = transcriptome ERS078461 = transcriptome ERS078462 = transcriptome ERS078463 = transcriptome ERS078464 = transcriptome ERS078465 = transcriptome ERS078466 = transcriptome ERS078467 = transcriptome ERS078468 = transcriptome [NRhind_01_all_P_bw] source_name = Transcripts - RNA-Seq - all data (forward strand) - Rhind (2011) description = EuropePMC: Rhind et al 2011) caption = Rhind (2011) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/NRhind_Transcriptome/Spom_all_61G9EAAXX_and_61G9UAAXX.+.sorted.bw source_type = bigwig display = off colour = #263B21 [NRhind_02_all_N_bw] source_name = Transcripts - RNA-Seq - all data (reverse strand) - Rhind (2011) description = EuropePMC: Rhind et al 2011) caption = Rhind (2011) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/NRhind_Transcriptome/Spom_all_61G9EAAXX_and_61G9UAAXX.-.sorted.bw source_type = bigwig display = off colour = #263B21 [NRhind_03_ds_P_bw] source_name = Transcripts - RNA-Seq - glucose depletion (forward strand) - Rhind (2011) description = EuropePMC: Rhind et al 2011) caption = Rhind (2011) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/NRhind_Transcriptome/Spom_ds_61G9EAAXX_and_61G9UAAXX.+.sorted.bw source_type = bigwig display = off colour = #263B21 [NRhind_04_ds_N_bw] source_name = Transcripts - RNA-Seq - glucose depletion (reverse strand) - Rhind (2011) description = EuropePMC: Rhind et al 2011) caption = Rhind (2011) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/NRhind_Transcriptome/Spom_ds_61G9EAAXX_and_61G9UAAXX.-.sorted.bw source_type = bigwig display = off colour = #263B21 [NRhind_05_hs_P_bw] source_name = Transcripts - RNA-Seq - heat shock (forward strand) - Rhind (2011) description = EuropePMC: Rhind et al 2011) caption = Rhind (2011) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/NRhind_Transcriptome/Spom_hs_61G9EAAXX_and_61G9UAAXX.+.sorted.bw source_type = bigwig display = off colour = #263B21 [NRhind_06_hs_N_bw] source_name = Transcripts - RNA-Seq - heat shock (reverse strand) - Rhind (2011) description = EuropePMC: Rhind et al 2011) caption = Rhind (2011) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/NRhind_Transcriptome/Spom_hs_61G9EAAXX_and_61G9UAAXX.-.sorted.bw source_type = bigwig display = off colour = #263B21 [NRhind_07_log_P_bw] source_name = Transcripts - RNA-Seq - log phase (forward strand) - Rhind (2011) description = EuropePMC: Rhind et al 2011) caption = Rhind (2011) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/NRhind_Transcriptome/Spom_log_61G9EAAXX_and_61G9UAAXX.+.sorted.bw source_type = bigwig display = off colour = #263B21 [NRhind_08_log_N_bw] source_name = Transcripts - RNA-Seq - log phase (reverse strand) - Rhind (2011) description = Log Phase mapped to the forward strand as described by Rhind et al 2011) caption = Rhind (2011) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/NRhind_Transcriptome/Spom_log_61G9EAAXX_and_61G9UAAXX.-.sorted.bw source_type = bigwig display = off colour = #263B21 [NRhind_09_plat_P_bw] source_name = Transcripts - RNA-Seq - stationary phase (forward strand) - Rhind (2011) description = EuropePMC: Rhind et al 2011) caption = Rhind (2011) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/NRhind_Transcriptome/Spom_plat_61G9EAAXX_and_61G9UAAXX.+.sorted.bw source_type = bigwig display = off colour = #263B21 [NRhind_10_plat_N_bw] source_name = Transcripts - RNA-Seq - stationary phase (reverse strand) - Rhind (2011) description = EuropePMC: Rhind et al 2011) caption = Rhind (2011) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/NRhind_Transcriptome/Spom_plat_61G9EAAXX_and_61G9UAAXX.-.sorted.bw source_type = bigwig display = off colour = #263B21 [GSE41773_01_GSM1024003] source_name = Nucleosome positioning - NGS - mitosis, 972 h-, haploid (NGS) - Soriano (2013) description = EuropePMC: Soriano et al 2013
GEO: GSE41773 caption = Soriano (2013) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE41773/GSM1024003_MN_Mit.bw source_type = bigWig display = off colour = #263B21 [GSE41773_02_GSM1024004] source_name = Nucleosome positioning - NGS - mitosis, pat1.114, diploid - Soriano (2013) description = EuropePMC: Soriano et al 2013
GEO: GSE41773 caption = Soriano (2013) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE41773/GSM1024004_MN_Mit_pat1.114.bw source_type = bigWig display = off colour = #263B21 [GSE41773_03_GSM1024000] source_name = Nucleosome positioning - NGS - meiosis 0h, pat1.114, diploid - Soriano (2013) description = EuropePMC: Soriano et al 2013
GEO: GSE41773 caption = Soriano (2013) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE41773/GSM1024000_MN_Mei0h.bw source_type = bigWig display = off colour = #263B21 [GSE41773_04_GSM1024001] source_name = Nucleosome positioning - NGS - meiosis 3h, pat1.114, diploid - Soriano (2013) description = EuropePMC: Soriano et al 2013
GEO: GSE41773 caption = Soriano (2013) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE41773/GSM1024001_MN_Mei3h.bw source_type = bigWig display = off colour = #263B21 [GSE41773_05_GSM1024002] source_name = Nucleosome positioning - NGS - meiosis 5h, pat1.114, diploid - Soriano (2013) description = EuropePMC: Soriano et al 2013
GEO: GSE41773 caption = Soriano (2013) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE41773/GSM1024002_MN_Mei5h.bw source_type = bigWig display = off colour = #263B21 [GSE41773_06_GSM1023946] source_name = Nucleosome positioning - tiling microarray - mitosis, 972 h-, haploid (tiling microarray) - Soriano (2013) description = EuropePMC: Soriano et al 2013
GEO: GSE41773 caption = Soriano (2013) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE41773/GSM1023946_MN_Mit.bw source_type = bigWig display = off colour = #263B21 [GSE41773_07_GSM1023948] source_name = Nucleosome positioning - tiling microarray - mitosis, pcr1(delta), haploid - Soriano (2013) description = EuropePMC: Soriano et al 2013
GEO: GSE41773 caption = Soriano (2013) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE41773/GSM1023948_MN_pcr1D.bw source_type = bigWig display = off colour = #263B21 [GSE41773_08_GSM1023947] source_name = Nucleosome positioning - tiling microarray - mitosis, atf1(delta), haploid - Soriano (2013) description = EuropePMC: Soriano et al 2013
GEO: GSE41773 caption = Soriano (2013) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE41773/GSM1023947_MN_atf1D.bw source_type = bigWig display = off colour = #263B21 # # The following tracks have been reveresed in the description to match the data # When reinported from GEO once corrected these values should get fixed. # [GSE41773_09_GSM1023953_N] source_name = Transcripts - tiling microarray - mitosis, 972h-, haploid (forward strand) - Soriano (2013) description = EuropePMC: Soriano et al 2013
GEO: GSE41773 caption = Soriano (2013) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE41773/GSM1023953_RNA_Mit_N.bw source_type = bigWig display = off colour = #263B21 [GSE41773_10_GSM1023953_P] source_name = Transcripts - tiling microarray - mitosis, 972h-, haploid (reverse strand) - Soriano (2013) description = EuropePMC: Soriano et al 2013
GEO: GSE41773 caption = Soriano (2013) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE41773/GSM1023953_RNA_Mit_P.bw source_type = bigWig display = off colour = #263B21 [GSE41773_11_GSM1023952_N] source_name = Transcripts - tiling microarray - mitosis, pat1.114, diploid (forward strand) - Soriano (2013) description = EuropePMC: Soriano et al 2013
GEO: GSE41773 caption = Soriano (2013) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE41773/GSM1023952_RNA_Mit_pat1.114_N.bw source_type = bigWig display = off colour = #263B21 [GSE41773_12_GSM1023952_P] source_name = Transcripts - tiling microarray - mitosis, pat1.114, diploid (reverse strand) - Soriano (2013) description = EuropePMC: Soriano et al 2013
GEO: GSE41773 caption = Soriano (2013) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE41773/GSM1023952_RNA_Mit_pat1.114_P.bw source_type = bigWig display = off colour = #263B21 [GSE41773_13_GSM1023949_N] source_name = Transcripts - tiling microarray - meiosis 0h, pat1.114, diploid (forward strand) - Soriano (2013) description = EuropePMC: Soriano et al 2013
GEO: GSE41773 caption = Soriano (2013) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE41773/GSM1023949_RNA_Mei0h_N.bw source_type = bigWig display = off colour = #263B21 [GSE41773_14_GSM1023949_P] source_name = Transcripts - tiling microarray - meiosis 0h, pat1.114, diploid (reverse strand) - Soriano (2013) description = EuropePMC: Soriano et al 2013
GEO: GSE41773 caption = Soriano (2013) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE41773/GSM1023949_RNA_Mei0h_P.bw source_type = bigWig display = off colour = #263B21 [GSE41773_15_GSM1023950_N] source_name = Transcripts - tiling microarray - meiosis 3h, pat1.114, diploid (forward strand) - Soriano (2013) description = EuropePMC: Soriano et al 2013
GEO: GSE41773 caption = Soriano (2013) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE41773/GSM1023950_RNA_Mei3h_N.bw source_type = bigWig display = off colour = #263B21 [GSE41773_16_GSM1023950_P] source_name = Transcripts - tiling microarray - meiosis 3h, pat1.114, diploid (reverse strand) - Soriano (2013) description = EuropePMC: Soriano et al 2013
GEO: GSE41773 caption = Soriano (2013) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE41773/GSM1023950_RNA_Mei3h_P.bw source_type = bigWig display = off colour = #263B21 [GSE41773_17_GSM1023951_N] source_name = Transcripts - tiling microarray - meiosis 5h, pat1.114, diploid (forward strand) - Soriano (2013) description = EuropePMC: Soriano et al 2013
GEO: GSE41773 caption = Soriano (2013) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE41773/GSM1023951_RNA_Mei5h_N.bw source_type = bigWig display = off colour = #263B21 [GSE41773_18_GSM1023951_P] source_name = Transcripts - tiling microarray - meiosis 5h, pat1.114, diploid (reverse strand) - Soriano (2013) description = EuropePMC: Soriano et al 2013
GEO: GSE41773 caption = Soriano (2013) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE41773/GSM1023951_RNA_Mei5h_P.bw source_type = bigWig display = off colour = #263B21 [GSE41773_19_GSM1023954_N] source_name = Transcripts - tiling microarray - mitosis, atf1(delta), haploid (forward strand) - Soriano (2013) description = EuropePMC: Soriano et al 2013
GEO: GSE41773 caption = Soriano (2013) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE41773/GSM1023954_RNA_atf1D_N.bw source_type = bigWig display = off colour = #263B21 [GSE41773_20_GSM1023954_P] source_name = Transcripts - tiling microarray - mitosis, atf1(delta), haploid (reverse strand) - Soriano (2013) description = EuropePMC: Soriano et al 2013
GEO: GSE41773 caption = Soriano (2013) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE41773/GSM1023954_RNA_atf1D_P.bw source_type = bigWig display = off colour = #263B21 [GSE41773_21_GSM1023955_N] source_name = Transcripts - tiling microarray - mitosis, pcr1(delta), haploid (forward strand) - Soriano (2013) description = EuropePMC: Soriano et al 2013
GEO: GSE41773 caption = Soriano (2013) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE41773/GSM1023955_RNA_pcr1D_N.bw source_type = bigWig display = off colour = #263B21 [GSE41773_22_GSM1023955_P] source_name = Transcripts - tiling microarray - mitosis, pcr1(delta), haploid (reverse strand) - Soriano (2013) description = EuropePMC: Soriano et al 2013
GEO: GSE41773 caption = Soriano (2013) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE41773/GSM1023955_RNA_pcr1D_P.bw source_type = bigWig display = off colour = #263B21 [JMatapolyAplus] source_name = Poly(A) sites - mRNA end sequencing - 972 h- (forward strand) - Mata (2013) description = EuropePMC: Mata 2013 caption = Mata (2013) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/JuanMata_polyA/polyA_plus.bw source_type = bigWig display = off colour = #263B21 [JMatapolyAminus] source_name = Poly(A) sites - mRNA end sequencing - 972 h- (reverse strand) - Mata (2013) description = EuropePMC: Mata 2013) caption = Mata (2013) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/JuanMata_polyA/polyA_minus.bw source_type = bigWig display = off colour = #263B21 [MSchlackow_01_ac_P] source_name = Poly(A) sites - RNA-Seq - all data (forward strand) - Schlackow (2013) description = EuropePMC: Schlackow et al 2013 caption = Schlackow (2013) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/MSchlackow_polyA/All_combined_P.bw source_type = bigWig display = off colour = #263B21 [MSchlackow_02_ac_N] source_name = Poly(A) sites - RNA-Seq - all data (reverse strand) - Schlackow (2013) description = EuropePMC: Schlackow et al 2013 caption = Schlackow (2013) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/MSchlackow_polyA/All_combined_N.bw source_type = bigWig display = off colour = #263B21 [MSchlackow_03_assc_P] source_name = Poly(A) sites - RNA-Seq - all strand-specific data (forward strand) - Schlackow (2013) description = EuropePMC: Schlackow et al 2013 caption = Schlackow (2013) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/MSchlackow_polyA/All_strandspecific_combined_P.bw source_type = bigWig display = off colour = #263B21 [MSchlackow_04_assc_N] source_name = Poly(A) sites - RNA-Seq - all strand-specific data (reverse strand) - Schlackow (2013) description = EuropePMC: Schlackow et al 2013 caption = Schlackow (2013) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/MSchlackow_polyA/All_strandspecific_combined_N.bw source_type = bigWig display = off colour = #263B21 [MSchlackow_05_nssc_P] source_name = Poly(A) sites - RNA-Seq - cycling, non-strand-specific, 972 h- (forward strand) - Schlackow (2013) description = EuropePMC: Schlackow et al 2013 caption = Schlackow (2013) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/MSchlackow_polyA/Nonstrandspecific_cycling_P.bw source_type = bigWig display = off colour = #263B21 [MSchlackow_06_nssc_N] source_name = Poly(A) sites - RNA-Seq - cycling, non-strand-specific, 972 h- (reverse strand) - Schlackow (2013) description = EuropePMC: Schlackow et al 2013 caption = Schlackow (2013) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/MSchlackow_polyA/Nonstrandspecific_cycling_N.bw source_type = bigWig display = off colour = #263B21 [MSchlackow_07_ma_P] source_name = Poly(A) sites - RNA-Seq - meiotic arrest, pat1-114 diploid (forward strand) - Schlackow (2013) description = EuropePMC: Schlackow et al 2013 caption = Schlackow (2013) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/MSchlackow_polyA/meiosis_arrested_P.bw source_type = bigWig display = off colour = #263B21 [MSchlackow_08_ma_N] source_name = Poly(A) sites - RNA-Seq - meiotic arrest, pat1-114 diploid (reverse strand) - Schlackow (2013) description = EuropePMC: Schlackow et al 2013 caption = Schlackow (2013) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/MSchlackow_polyA/meiosis_arrested_N.bw source_type = bigWig display = off colour = #263B21 [MSchlackow_09_qa24_P] source_name = Poly(A) sites - RNA-Seq - quiescence 24h, 972 h- (forward strand) - Schlackow (2013) description = EuropePMC: Schlackow et al 2013 caption = Schlackow (2013) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/MSchlackow_polyA/quiescence_arrested_24h_nitrogen_depletion_P.bw source_type = bigWig display = off colour = #263B21 [MSchlackow_10_qa24_N] source_name = Poly(A) sites - RNA-Seq - quiescence 24h, 972 h- (reverse strand) - Schlackow (2013) description = EuropePMC: Schlackow et al 2013 caption = Schlackow (2013) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/MSchlackow_polyA/quiescence_arrested_24h_nitrogen_depletion_N.bw source_type = bigWig display = off colour = #263B21 [MSchlackow_11_qa7_P] source_name = Poly(A) sites - RNA-Seq - quiescence 7d, 972 h- (forward strand) - Schlackow (2013) description = EuropePMC: Schlackow et al 2013 caption = Schlackow (2013) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/MSchlackow_polyA/quiescence_arreseted_7days_nitrogen_depletion_P.bw source_type = bigWig display = off colour = #263B21 [MSchlackow_12_qa7_N] source_name = Poly(A) sites - RNA-Seq - quiescence 7d, 972 h- (reverse strand) - Schlackow (2013) description = EuropePMC: Schlackow et al 2013 caption = Schlackow (2013) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/MSchlackow_polyA/quiescence_arreseted_7days_nitrogen_depletion_N.bw source_type = bigWig display = off colour = #263B21 [MSchlackow_13_ssc_P] source_name = Poly(A) sites - RNA-Seq - strand specific cycling (forward strand) - Schlackow (2013) description = EuropePMC: Schlackow et al 2013 caption = Schlackow (2013) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/MSchlackow_polyA/Strandspecific_cycling_P.bw source_type = bigWig display = off colour = #263B21 [MSchlackow_14_ssc_N] source_name = Poly(A) sites - RNA-Seq - strand specific cycling (reverse strand) - Schlackow (2013) description = EuropePMC: Schlackow et al 2013 caption = Schlackow (2013) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/MSchlackow_polyA/Strandspecific_cycling_N.bw source_type = bigWig display = off colour = #263B21 [GSE24360_01] source_name = Chromatin binding - DamID / tiling array - Swi6 binding sites, unfused Dam used as experimental control, repeat 1 - Woolcock (2011) description = EuropePMC: Woolcock et al 2011
GEO: GSE24360 caption = Woolcock (2011) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_01.bw source_type = bigWig display = off colour = #263B21 [GSE24360_04] source_name = Chromatin binding - DamID / tiling array - Swi6 binding sites, clr4(delta), repeat 1 - Woolcock (2011) description = EuropePMC: Woolcock et al 2011
GEO: GSE24360 caption = Woolcock (2011) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_02.bw source_type = bigWig display = off colour = #263B21 [GSE24360_07] source_name = Chromatin binding - DamID / tiling array - Swi6 binding sites, clr4(delta) used as experimental control, repeat 1 - Woolcock (2011) description = EuropePMC: Woolcock et al 2011
GEO: GSE24360 caption = Woolcock (2011) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_03.bw source_type = bigWig display = off colour = #263B21 [GSE24360_02] source_name = Chromatin binding - DamID / tiling array - Swi6 binding sites, unfused Dam used as experimental control, repeat 2 - Woolcock (2011) description = EuropePMC: Woolcock et al 2011
GEO: GSE24360 caption = Woolcock (2011) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_04.bw source_type = bigWig display = off colour = #263B21 [GSE24360_05] source_name = Chromatin binding - DamID / tiling array - Swi6 binding sites, clr4(delta), repeat 2 - Woolcock (2011) description = EuropePMC: Woolcock et al 2011
GEO: GSE24360 caption = Woolcock (2011) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_05.bw source_type = bigWig display = off colour = #263B21 [GSE24360_08] source_name = Chromatin binding - DamID / tiling array - Swi6 binding sites, clr4(delta) used as experimental control, repeat 2 - Woolcock (2011) description = EuropePMC: Woolcock et al 2011
GEO: GSE24360 caption = Woolcock (2011) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_06.bw source_type = bigWig display = off colour = #263B21 [GSE24360_03] source_name = Chromatin binding - DamID / tiling array - Swi6 binding sites, unfused Dam used as experimental control, repeat 3 - Woolcock (2011) description = EuropePMC: Woolcock et al 2011
GEO: GSE24360 caption = Woolcock (2011) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_07.bw source_type = bigWig display = off colour = #263B21 [GSE24360_06] source_name = Chromatin binding - DamID / tiling array - Swi6 binding sites, clr4(delta), repeat 3 - Woolcock (2011) description = EuropePMC: Woolcock et al 2011
GEO: GSE24360 caption = Woolcock (2011) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_08.bw source_type = bigWig display = off colour = #263B21 [GSE24360_09] source_name = Chromatin binding - DamID / tiling array - Swi6 binding sites, clr4(delta) used as experimental control, repeat 3 - Woolcock (2011) description = EuropePMC: Woolcock et al 2011
GEO: GSE24360 caption = Woolcock (2011) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_09.bw source_type = bigWig display = off colour = #263B21 [GSE24360_10] source_name = Chromatin binding - DamID / tiling array - Swi6 binding sites, dcr1(delta), repeat 1 - Woolcock (2011) description = EuropePMC: Woolcock et al 2011
GEO: GSE24360 caption = Woolcock (2011) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_10.bw source_type = bigWig display = off colour = #263B21 [GSE24360_11] source_name = Chromatin binding - DamID / tiling array - Swi6 binding sites, dcr1(delta), repeat 2 - Woolcock (2011) description = EuropePMC: Woolcock et al 2011
GEO: GSE24360 caption = Woolcock (2011) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_11.bw source_type = bigWig display = off colour = #263B21 [GSE24360_12] source_name = Chromatin binding - DamID / tiling array - Dcr1 binding sites, repeat 1 - Woolcock (2011) description = EuropePMC: Woolcock et al 2011
GEO: GSE24360 caption = Woolcock (2011) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_12.bw source_type = bigWig display = off colour = #263B21 [GSE24360_15] source_name = Chromatin binding - DamID / tiling array - Arb1 binding sites, repeat 1 - Woolcock (2011) description = EuropePMC: Woolcock et al 2011
GEO: GSE24360 caption = Woolcock (2011) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_13.bw source_type = bigWig display = off colour = #263B21 [GSE24360_13] source_name = Chromatin binding - DamID / tiling array - Dcr1 binding sites, repeat 2 - Woolcock (2011) description = EuropePMC: Woolcock et al 2011
GEO: GSE24360 caption = Woolcock (2011) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_15.bw source_type = bigWig display = off colour = #263B21 [GSE24360_14] source_name = Chromatin binding - DamID / tiling array - Dcr1 binding sites, repeat 3 - Woolcock (2011) description = EuropePMC: Woolcock et al 2011
GEO: GSE24360 caption = Woolcock (2011) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_18.bw source_type = bigWig display = off colour = #263B21 [GSE24360_16] source_name = Chromatin binding - DamID / tiling array - Arb1 binding sites, repeat 2 - Woolcock (2011) description = EuropePMC: Woolcock et al 2011
GEO: GSE24360 caption = Woolcock (2011) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_16.bw source_type = bigWig display = off colour = #263B21 [GSE24360_17] source_name = Chromatin binding - DamID / tiling array - Arb1 binding sites, repeat 3 - Woolcock (2011) description = EuropePMC: Woolcock et al 2011
GEO: GSE24360 caption = Woolcock (2011) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_19.bw source_type = bigWig display = off colour = #263B21 [GSE24360_18] source_name = Chromatin binding - DamID / tiling array - Rdp1 binding sites, repeat 1 - Woolcock (2011) description = EuropePMC: Woolcock et al 2011
GEO: GSE24360 caption = Woolcock (2011) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_14.bw source_type = bigWig display = off colour = #263B21 [GSE24360_19] source_name = Chromatin binding - DamID / tiling array - Rdp1 binding sites, repeat 2 - Woolcock (2011) description = EuropePMC: Woolcock et al 2011
GEO: GSE24360 caption = Woolcock (2011) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_17.bw source_type = bigWig display = off colour = #263B21 [GSE24360_20] source_name = Chromatin binding - DamID / tiling array - Rdp1 binding sites, repeat 3 - Woolcock (2011) description = EuropePMC: Woolcock et al 2011
GEO: GSE24360 caption = Woolcock (2011) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_20.bw source_type = bigWig display = off colour = #263B21 [GSE24360_21] source_name = Chromatin binding - DamID / tiling array - Dcr1 binding sites, clr4(delta), repeat 1 - Woolcock (2011) description = EuropePMC: Woolcock et al 2011
GEO: GSE24360 caption = Woolcock (2011) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_21.bw source_type = bigWig display = off colour = #263B21 [GSE24360_22] source_name = Chromatin binding - DamID / tiling array - Dcr1 binding sites, clr4(delta), repeat 2 - Woolcock (2011) description = EuropePMC: Woolcock et al 2011
GEO: GSE24360 caption = Woolcock (2011) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_23.bw source_type = bigWig display = off colour = #263B21 [GSE24360_23] source_name = Chromatin binding - DamID / tiling array - Dcr1 binding sites, clr4(delta), repeat 3 - Woolcock (2011) description = EuropePMC: Woolcock et al 2011
GEO: GSE24360 caption = Woolcock (2011) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_26.bw source_type = bigWig display = off colour = #263B21 [GSE24360_24] source_name = Chromatin binding - DamID / tiling array - Arb1 binding sites, clr4(delta), repeat 1 - Woolcock (2011) description = EuropePMC: Woolcock et al 2011
GEO: GSE24360 caption = Woolcock (2011) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_22.bw source_type = bigWig display = off colour = #263B21 [GSE24360_25] source_name = Chromatin binding - DamID / tiling array - Arb1 binding sites, clr4(delta), repeat 2 - Woolcock (2011) description = EuropePMC: Woolcock et al 2011
GEO: GSE24360 caption = Woolcock (2011) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_24.bw source_type = bigWig display = off colour = #263B21 [GSE24360_26] source_name = Chromatin binding - DamID / tiling array - Arb1 binding sites, clr4(delta), repeat 3 - Woolcock (2011) description = EuropePMC: Woolcock et al 2011
GEO: GSE24360 caption = Woolcock (2011) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_27.bw source_type = bigWig display = off colour = #263B21 [GSE24360_27] source_name = Chromatin binding - DamID / tiling array - Rdp1 binding sites, clr4(delta), repeat 1 - Woolcock (2011) description = EuropePMC: Woolcock et al 2011
GEO: GSE24360 caption = Woolcock (2011) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_25.bw source_type = bigWig display = off colour = #263B21 [GSE24360_28] source_name = Chromatin binding - DamID / tiling array - Rdp1 binding sites, clr4(delta), repeat 2 - Woolcock (2011) description = EuropePMC: Woolcock et al 2011
GEO: GSE24360 caption = Woolcock (2011) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_28.bw source_type = bigWig display = off colour = #263B21 [GSE24360_29] source_name = Chromatin binding - DamID / tiling array - Rdp1 binding sites, clr4(delta), repeat 3 - Woolcock (2011) description = EuropePMC: Woolcock et al 2011
GEO: GSE24360 caption = Woolcock (2011) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_29.bw source_type = bigWig display = off colour = #263B21 [NRhind_01_WT] source_name = Replication origins - HT sequencing - wild type, elutriation, +HU - Xu (2012) description = EuropePMC: Xu 2012. caption = Xu (2012) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/NRhind_RepProfile/NRhind_WT.bw source_type = bigWig display = off colour = #263B21 [NRhind_02_cdc25] source_name = Replication origins - HT sequencing - cdc25-ts, block/release, +HU - Xu (2012) description = EuropePMC: Xu 2012. caption = Xu (2012) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/NRhind_RepProfile/NRhind_cdc25-22.bw source_type = bigWig display = off colour = #263B21 [NRhind_03_dfp1] source_name = Replication origins - HT sequencing - dfp1-3A, elutriation, +HU - Xu (2012) description = EuropePMC: Xu 2012. caption = Xu (2012) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/NRhind_RepProfile/NRhind_dfp1-3A.bw source_type = bigWig display = off colour = #263B21 [ERS146817] source_name = Transcripts - RNA-Seq - Quiescent cells (repeat 1) total RNA - Marguerat (2012) caption = Marguerat (2012) description = Grown for 24h in EMM medium without nitrogen source
EuropePMC: Marguerat 2012.
ArrayExpress: E-MTAB-1154.
ENA (Study): ERP001483.
ENA (Sample): . source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001483/ERS146817.bw source_type = bigWig display = off colour = #263B21 [ERS146818] source_name = Transcripts - RNA-Seq - Quiescent cells (repeat 2) total RNA - Marguerat (2012) caption = Marguerat (2012) description = Grown for 24h in EMM medium without nitrogen source
EuropePMC: Marguerat 2012.
ArrayExpress: E-MTAB-1154.
ENA (Study): ERP001483.
ENA (Sample): ERS146818. source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001483/ERS146818.bw source_type = bigWig display = off colour = #263B21 [ERS146819] source_name = Transcripts - RNA-Seq - Proliferating cells (repeat 1) total RNA - Marguerat (2012) caption = Marguerat (2012) description = Grown in log phase in EMM medium
EuropePMC: Marguerat 2012.
ArrayExpress: E-MTAB-1154.
ENA (Study): ERP001483.
ENA (Sample): ERS146819. source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001483/ERS146819.bw source_type = bigWig display = off colour = #263B21 [ERS146820] source_name = Transcripts - RNA-Seq - Quiescent cells (repeat 1) poly(A)+ RNA - Marguerat (2012) caption = Marguerat (2012) description = Grown for 24h in EMM medium without nitrogen source
EuropePMC: Marguerat 2012.
ArrayExpress: E-MTAB-1154.
ENA (Study): ERP001483.
ENA (Sample): ERS146820. source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001483/ERS146820.bw source_type = bigWig display = off colour = #263B21 [ERS146821] source_name = Transcripts - RNA-Seq - Proliferating cells (repeat 2) total RNA - Marguerat (2012) caption = Marguerat (2012) description = Grown in log phase in EMM medium
EuropePMC: Marguerat 2012.
ArrayExpress: E-MTAB-1154.
ENA (Study): ERP001483.
ENA (Sample): ERS146821. source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001483/ERS146821.bw source_type = bigWig display = off colour = #263B21 [ERS146822] source_name = Transcripts - RNA-Seq - Quiescent cells (repeat 2) poly(A)+ RNA - Marguerat (2012) caption = Marguerat (2012) description = Grown for 24h in EMM medium without nitrogen source
EuropePMC: Marguerat 2012.
ArrayExpress: E-MTAB-1154.
ENA (Study): ERP001483.
ENA (Sample): ERS146822. source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001483/ERS146822.bw source_type = bigWig display = off colour = #263B21 [ERS146823] source_name = Transcripts - RNA-Seq - Proliferating cells (repeat 1) poly(A)+ RNA - Marguerat (2012) caption = Marguerat (2012) description = Grown in log phase in EMM medium
EuropePMC: Marguerat 2012.
ArrayExpress: E-MTAB-1154.
ENA (Study): ERP001483.
ENA (Sample): ERS146823. source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001483/ERS146823.bw source_type = bigWig display = off colour = #263B21 [ERS146824] source_name = Transcripts - RNA-Seq - Proliferating cells (repeat 2) poly(A)+ RNA - Marguerat (2012) caption = Marguerat (2012) description = Grown in log phase in EMM medium
EuropePMC: Marguerat 2012.
ArrayExpress: E-MTAB-1154.
ENA (Study): ERP001483.
ENA (Sample): ERS146824. source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001483/ERS146824.bw source_type = bigWig display = off colour = #263B21 [ERS078438] source_name = Transcripts - RNA-Seq - run34_s3 (ERS078438) - Wilhelm (2008) caption = Wilhelm (2008) description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5 source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078438.bw source_type = bigWig display = off colour = #263B21 [ERS078439] source_name = Transcripts - RNA-Seq - run30_s8_Spombe_cDNA (ERS078439) - Wilhelm (2008) caption = Wilhelm (2008) description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5 source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078439.bw source_type = bigWig display = off colour = #263B21 [ERS078440] source_name = Transcripts - RNA-Seq - run33_s7 (ERS078440) - Wilhelm (2008) caption = Wilhelm (2008) description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5 source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078440.bw source_type = bigWig display = off colour = #263B21 [ERS078441] source_name = Transcripts - RNA-Seq - run34_s5 (ERS078441) - Wilhelm (2008) caption = Wilhelm (2008) description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5 source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078441.bw source_type = bigWig display = off colour = #263B21 [ERS078442] source_name = Transcripts - RNA-Seq - run38_s5 (ERS078442) - Wilhelm (2008) caption = Wilhelm (2008) description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5 source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078442.bw source_type = bigWig display = off colour = #263B21 [ERS078443] source_name = Transcripts - RNA-Seq - run33_s6 (ERS078443) - Wilhelm (2008) caption = Wilhelm (2008) description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5 source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078443.bw source_type = bigWig display = off colour = #263B21 [ERS078444] source_name = Transcripts - RNA-Seq - run33_s4 (ERS078444) - Wilhelm (2008) caption = Wilhelm (2008) description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5 source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078444.bw source_type = bigWig display = off colour = #263B21 [ERS078445] source_name = Transcripts - RNA-Seq - 67_s_5 (ERS078445) - Wilhelm (2008) caption = Wilhelm (2008) description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5 source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078445.bw source_type = bigWig display = off colour = #263B21 [ERS078446] source_name = Transcripts - RNA-Seq - run40_s7 (ERS078446) - Wilhelm (2008) caption = Wilhelm (2008) description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5 source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078446.bw source_type = bigWig display = off colour = #263B21 [ERS078447] source_name = Transcripts - RNA-Seq - run38_s6 (ERS078447) - Wilhelm (2008) caption = Wilhelm (2008) description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5 source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078447.bw source_type = bigWig display = off colour = #263B21 [ERS078448] source_name = Transcripts - RNA-Seq - 67_s_2 (ERS078448) - Wilhelm (2008) caption = Wilhelm (2008) description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5 source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078448.bw source_type = bigWig display = off colour = #263B21 [ERS078449] source_name = Transcripts - RNA-Seq - run33_s5 (ERS078449) - Wilhelm (2008) caption = Wilhelm (2008) description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5 source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078449.bw source_type = bigWig display = off colour = #263B21 [ERS078450] source_name = Transcripts - RNA-Seq - run34_s1 (ERS078450) - Wilhelm (2008) caption = Wilhelm (2008) description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5 source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078450.bw source_type = bigWig display = off colour = #263B21 [ERS078451] source_name = Transcripts - RNA-Seq - run33_s3 (ERS078451) - Wilhelm (2008) caption = Wilhelm (2008) description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5 source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078451.bw source_type = bigWig display = off colour = #263B21 [ERS078452] source_name = Transcripts - RNA-Seq - IL2_22_SPombe (ERS078452 - Wilhelm (2008) caption = Wilhelm (2008) description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5 source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078452.bw source_type = bigWig display = off colour = #263B21 [ERS078453] source_name = Transcripts - RNA-Seq - ILease15_16Spombe_cDNA (ERS078453) - Wilhelm (2008) caption = Wilhelm (2008) description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5 source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078453.bw source_type = bigWig display = off colour = #263B21 [ERS078454] source_name = Transcripts - RNA-Seq - run38_s4 (ERS078454) - Wilhelm (2008) caption = Wilhelm (2008) description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5 source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078454.bw source_type = bigWig display = off colour = #263B21 [ERS078455] source_name = Transcripts - RNA-Seq - run34_s4 (ERS078455) - Wilhelm (2008) caption = Wilhelm (2008) description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5 source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078455.bw source_type = bigWig display = off colour = #263B21 [ERS078456] source_name = Transcripts - RNA-Seq - run38_s7 (ERS078456) - Wilhelm (2008) caption = Wilhelm (2008) description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5 source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078456.bw source_type = bigWig display = off colour = #263B21 [ERS078457] source_name = Transcripts - RNA-Seq - run38_s1 (ERS078457) - Wilhelm (2008) caption = Wilhelm (2008) description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5 source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078457.bw source_type = bigWig display = off colour = #263B21 [ERS078458] source_name = Transcripts - RNA-Seq - run33_s1 (ERS078458) - Wilhelm (2008) caption = Wilhelm (2008) description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5 source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078458.bw source_type = bigWig display = off colour = #263B21 [ERS078459] source_name = Transcripts - RNA-Seq - run30_s7_Spombe_cDNA (ERS078459) - Wilhelm (2008) caption = Wilhelm (2008) description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5 source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078459.bw source_type = bigWig display = off colour = #263B21 [ERS078460] source_name = Transcripts - RNA-Seq - run40_s8 (ERS078460) - Wilhelm (2008) caption = Wilhelm (2008) description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5 source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078460.bw source_type = bigWig display = off colour = #263B21 [ERS078461] source_name = Transcripts - RNA-Seq - 67_s_3 (ERS078461) - Wilhelm (2008) caption = Wilhelm (2008) description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5 source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078461.bw source_type = bigWig display = off colour = #263B21 [ERS078462] source_name = Transcripts - RNA-Seq - run34_s2 (ERS078462) - Wilhelm (2008) caption = Wilhelm (2008) description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5 source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078462.bw source_type = bigWig display = off colour = #263B21 [ERS078463] source_name = Transcripts - RNA-Seq - run33_s2 (ERS078463) - Wilhelm (2008) caption = Wilhelm (2008) description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5 source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078463.bw source_type = bigWig display = off colour = #263B21 [ERS078464] source_name = Transcripts - RNA-Seq - run38_s8 (ERS078464) - Wilhelm (2008) caption = Wilhelm (2008) description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5 source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078464.bw source_type = bigWig display = off colour = #263B21 [ERS078465] source_name = Transcripts - RNA-Seq - run38_s3 (ERS078465) - Wilhelm (2008) caption = Wilhelm (2008) description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5 source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078465.bw source_type = bigWig display = off colour = #263B21 [ERS078466] source_name = Transcripts - RNA-Seq - 67_s_1 (ERS078466) - Wilhelm (2008) caption = Wilhelm (2008) description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5 source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078466.bw source_type = bigWig display = off colour = #263B21 [ERS078467] source_name = Transcripts - RNA-Seq - run38_s2 (ERS078467) - Wilhelm (2008) caption = Wilhelm (2008) description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5 source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078467.bw source_type = bigWig display = off colour = #263B21 [ERS078468] source_name = Transcripts - RNA-Seq - 67_s_6 (ERS078468) - Wilhelm (2008) caption = Wilhelm (2008) description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5 source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078468.bw source_type = bigWig display = off colour = #263B21 [ENSEMBL_INTERNAL_BED_SOURCES] Bitton_IBP_24709818 = pb_intron_branch_point RNAcentral = transcript [Bitton_IBP_24709818] source_name = Intron Branch Point - RNA-Seq - all data - Bitton (2014) description = EuropePMC: Bitton et al 2014 caption = Bitton (2014) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/Bitton_IBP_24709818/BranchPoint_v2.bed source_type = bed display = off colour = #263B21 [ENSEMBL_INTERNAL_BAM_SOURCES] NRhind_01_all_P = transcriptome NRhind_02_all_N = transcriptome NRhind_03_log_P = transcriptome NRhind_04_log_N = transcriptome NRhind_05_ds_P = transcriptome NRhind_06_ds_N = transcriptome NRhind_07_hs_P = transcriptome NRhind_08_hs_N = transcriptome NRhind_09_plat_P = transcriptome NRhind_10_plat_N = transcriptome [NRhind_01_all_P] source_name = Transcripts - RNA-Seq - all data (forward strand) - Rhind (2011) description = EuropePMC: Rhind et al 2011) caption = Rhind (2011) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/NRhind_Transcriptome/Spom_all_61G9EAAXX_and_61G9UAAXX.+.sorted.bam source_type = rnaseq display = off colour = #263B21 [NRhind_02_all_N] source_name = Transcripts - RNA-Seq - all data (reverse strand) - Rhind (2011) description = EuropePMC: Rhind et al 2011) caption = Rhind (2011) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/NRhind_Transcriptome/Spom_all_61G9EAAXX_and_61G9UAAXX.-.sorted.bam source_type = rnaseq display = off colour = #263B21 [NRhind_03_log_P] source_name = Transcripts - RNA-Seq - log phase (forward strand) - Rhind (2011) description = EuropePMC: Rhind et al 2011) caption = Rhind (2011) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/NRhind_Transcriptome/Spom_log_61G9EAAXX_and_61G9UAAXX.+.sorted.bam source_type = rnaseq display = off colour = #263B21 [NRhind_04_log_N] source_name = Transcripts - RNA-Seq - log phase (reverse strand) - Rhind (2011) description = Log Phase mapped to the forward strand as described by Rhind et al 2011) caption = Rhind (2011) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/NRhind_Transcriptome/Spom_log_61G9EAAXX_and_61G9UAAXX.-.sorted.bam source_type = rnaseq display = off colour = #263B21 [NRhind_05_ds_P] source_name = Transcripts - RNA-Seq - glucose depletion (forward strand) - Rhind (2011) description = EuropePMC: Rhind et al 2011) caption = Rhind (2011) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/NRhind_Transcriptome/Spom_ds_61G9EAAXX_and_61G9UAAXX.+.sorted.bam source_type = rnaseq display = off colour = #263B21 [NRhind_06_ds_N] source_name = Transcripts - RNA-Seq - glucose depletion (reverse strand) - Rhind (2011) description = EuropePMC: Rhind et al 2011) caption = Rhind (2011) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/NRhind_Transcriptome/Spom_ds_61G9EAAXX_and_61G9UAAXX.-.sorted.bam source_type = rnaseq display = off colour = #263B21 [NRhind_07_hs_P] source_name = Transcripts - RNA-Seq - heat shock (forward strand) - Rhind (2011) description = EuropePMC: Rhind et al 2011) caption = Rhind (2011) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/NRhind_Transcriptome/Spom_hs_61G9EAAXX_and_61G9UAAXX.+.sorted.bam source_type = rnaseq display = off colour = #263B21 [NRhind_08_hs_N] source_name = Transcripts - RNA-Seq - heat shock (reverse strand) - Rhind (2011) description = EuropePMC: Rhind et al 2011) caption = Rhind (2011) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/NRhind_Transcriptome/Spom_hs_61G9EAAXX_and_61G9UAAXX.-.sorted.bam source_type = rnaseq display = off colour = #263B21 [NRhind_09_plat_P] source_name = Transcripts - RNA-Seq - stationary phase (forward strand) - Rhind (2011) description = EuropePMC: Rhind et al 2011) caption = Rhind (2011) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/NRhind_Transcriptome/Spom_plat_61G9EAAXX_and_61G9UAAXX.+.sorted.bam source_type = rnaseq display = off colour = #263B21 [NRhind_10_plat_N] source_name = Transcripts - RNA-Seq - stationary phase (reverse strand) - Rhind (2011) description = EuropePMC: Rhind et al 2011) caption = Rhind (2011) source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/NRhind_Transcriptome/Spom_plat_61G9EAAXX_and_61G9UAAXX.-.sorted.bam source_type = rnaseq display = off colour = #263B21