## This file contains the Ensembl configuration tidied up for processing into
## JBrowse configuration
[ENSEMBL_INTERNAL_BIGWIG_SOURCES]
NRhind_01_all_P_bw = transcriptome
NRhind_02_all_N_bw = transcriptome
NRhind_03_ds_P_bw = transcriptome
NRhind_04_ds_N_bw = transcriptome
NRhind_05_hs_P_bw = transcriptome
NRhind_06_hs_N_bw = transcriptome
NRhind_07_log_P_bw = transcriptome
NRhind_08_log_N_bw = transcriptome
NRhind_09_plat_P_bw = transcriptome
NRhind_10_plat_N_bw = transcriptome
JMatapolyAplus = polya_sites
JMatapolyAminus = polya_sites
MSchlackow_01_ac_P = polya_sites
MSchlackow_02_ac_N = polya_sites
MSchlackow_03_assc_P = polya_sites
MSchlackow_04_assc_N = polya_sites
MSchlackow_05_nssc_P = polya_sites
MSchlackow_06_nssc_N = polya_sites
MSchlackow_07_ma_P = polya_sites
MSchlackow_08_ma_N = polya_sites
MSchlackow_09_qa24_P = polya_sites
MSchlackow_10_qa24_N = polya_sites
MSchlackow_11_qa7_P = polya_sites
MSchlackow_12_qa7_N = polya_sites
MSchlackow_13_ssc_P = polya_sites
MSchlackow_14_ssc_N = polya_sites
GSE24360_01 = chromatin_binding
GSE24360_02 = chromatin_binding
GSE24360_03 = chromatin_binding
GSE24360_04 = chromatin_binding
GSE24360_05 = chromatin_binding
GSE24360_06 = chromatin_binding
GSE24360_07 = chromatin_binding
GSE24360_08 = chromatin_binding
GSE24360_09 = chromatin_binding
GSE24360_10 = chromatin_binding
GSE24360_11 = chromatin_binding
GSE24360_12 = chromatin_binding
GSE24360_13 = chromatin_binding
GSE24360_14 = chromatin_binding
GSE24360_15 = chromatin_binding
GSE24360_16 = chromatin_binding
GSE24360_17 = chromatin_binding
GSE24360_18 = chromatin_binding
GSE24360_19 = chromatin_binding
GSE24360_20 = chromatin_binding
GSE24360_21 = chromatin_binding
GSE24360_22 = chromatin_binding
GSE24360_23 = chromatin_binding
GSE24360_24 = chromatin_binding
GSE24360_25 = chromatin_binding
GSE24360_26 = chromatin_binding
GSE24360_27 = chromatin_binding
GSE24360_28 = chromatin_binding
GSE24360_29 = chromatin_binding
NRhind_01_WT = replication_profiling
NRhind_02_cdc25 = replication_profiling
NRhind_03_dfp1 = replication_profiling
GSE41773_01_GSM1024003 = nucleosome
GSE41773_02_GSM1024004 = nucleosome
GSE41773_03_GSM1024000 = nucleosome
GSE41773_04_GSM1024001 = nucleosome
GSE41773_05_GSM1024002 = nucleosome
GSE41773_06_GSM1023946 = nucleosome
GSE41773_07_GSM1023948 = nucleosome
GSE41773_08_GSM1023947 = nucleosome
GSE41773_09_GSM1023953_N = transcriptome
GSE41773_10_GSM1023953_P = transcriptome
GSE41773_11_GSM1023952_N = transcriptome
GSE41773_12_GSM1023952_P = transcriptome
GSE41773_13_GSM1023949_N = transcriptome
GSE41773_14_GSM1023949_P = transcriptome
GSE41773_15_GSM1023950_N = transcriptome
GSE41773_16_GSM1023950_P = transcriptome
GSE41773_17_GSM1023951_N = transcriptome
GSE41773_18_GSM1023951_P = transcriptome
GSE41773_19_GSM1023954_N = transcriptome
GSE41773_20_GSM1023954_P = transcriptome
GSE41773_21_GSM1023955_N = transcriptome
GSE41773_22_GSM1023955_P = transcriptome
ERS146817 = transcriptome
ERS146818 = transcriptome
ERS146819 = transcriptome
ERS146820 = transcriptome
ERS146821 = transcriptome
ERS146822 = transcriptome
ERS146823 = transcriptome
ERS146824 = transcriptome
ERS078438 = transcriptome
ERS078439 = transcriptome
ERS078440 = transcriptome
ERS078441 = transcriptome
ERS078442 = transcriptome
ERS078443 = transcriptome
ERS078444 = transcriptome
ERS078445 = transcriptome
ERS078446 = transcriptome
ERS078447 = transcriptome
ERS078448 = transcriptome
ERS078449 = transcriptome
ERS078450 = transcriptome
ERS078451 = transcriptome
ERS078452 = transcriptome
ERS078453 = transcriptome
ERS078454 = transcriptome
ERS078455 = transcriptome
ERS078456 = transcriptome
ERS078457 = transcriptome
ERS078458 = transcriptome
ERS078459 = transcriptome
ERS078460 = transcriptome
ERS078461 = transcriptome
ERS078462 = transcriptome
ERS078463 = transcriptome
ERS078464 = transcriptome
ERS078465 = transcriptome
ERS078466 = transcriptome
ERS078467 = transcriptome
ERS078468 = transcriptome
[NRhind_01_all_P_bw]
source_name = Transcripts - RNA-Seq - all data (forward strand) - Rhind (2011)
description = EuropePMC: Rhind et al 2011)
caption = Rhind (2011)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/NRhind_Transcriptome/Spom_all_61G9EAAXX_and_61G9UAAXX.+.sorted.bw
source_type = bigwig
display = off
colour = #263B21
[NRhind_02_all_N_bw]
source_name = Transcripts - RNA-Seq - all data (reverse strand) - Rhind (2011)
description = EuropePMC: Rhind et al 2011)
caption = Rhind (2011)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/NRhind_Transcriptome/Spom_all_61G9EAAXX_and_61G9UAAXX.-.sorted.bw
source_type = bigwig
display = off
colour = #263B21
[NRhind_03_ds_P_bw]
source_name = Transcripts - RNA-Seq - glucose depletion (forward strand) - Rhind (2011)
description = EuropePMC: Rhind et al 2011)
caption = Rhind (2011)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/NRhind_Transcriptome/Spom_ds_61G9EAAXX_and_61G9UAAXX.+.sorted.bw
source_type = bigwig
display = off
colour = #263B21
[NRhind_04_ds_N_bw]
source_name = Transcripts - RNA-Seq - glucose depletion (reverse strand) - Rhind (2011)
description = EuropePMC: Rhind et al 2011)
caption = Rhind (2011)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/NRhind_Transcriptome/Spom_ds_61G9EAAXX_and_61G9UAAXX.-.sorted.bw
source_type = bigwig
display = off
colour = #263B21
[NRhind_05_hs_P_bw]
source_name = Transcripts - RNA-Seq - heat shock (forward strand) - Rhind (2011)
description = EuropePMC: Rhind et al 2011)
caption = Rhind (2011)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/NRhind_Transcriptome/Spom_hs_61G9EAAXX_and_61G9UAAXX.+.sorted.bw
source_type = bigwig
display = off
colour = #263B21
[NRhind_06_hs_N_bw]
source_name = Transcripts - RNA-Seq - heat shock (reverse strand) - Rhind (2011)
description = EuropePMC: Rhind et al 2011)
caption = Rhind (2011)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/NRhind_Transcriptome/Spom_hs_61G9EAAXX_and_61G9UAAXX.-.sorted.bw
source_type = bigwig
display = off
colour = #263B21
[NRhind_07_log_P_bw]
source_name = Transcripts - RNA-Seq - log phase (forward strand) - Rhind (2011)
description = EuropePMC: Rhind et al 2011)
caption = Rhind (2011)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/NRhind_Transcriptome/Spom_log_61G9EAAXX_and_61G9UAAXX.+.sorted.bw
source_type = bigwig
display = off
colour = #263B21
[NRhind_08_log_N_bw]
source_name = Transcripts - RNA-Seq - log phase (reverse strand) - Rhind (2011)
description = Log Phase mapped to the forward strand as described by Rhind et al 2011)
caption = Rhind (2011)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/NRhind_Transcriptome/Spom_log_61G9EAAXX_and_61G9UAAXX.-.sorted.bw
source_type = bigwig
display = off
colour = #263B21
[NRhind_09_plat_P_bw]
source_name = Transcripts - RNA-Seq - stationary phase (forward strand) - Rhind (2011)
description = EuropePMC: Rhind et al 2011)
caption = Rhind (2011)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/NRhind_Transcriptome/Spom_plat_61G9EAAXX_and_61G9UAAXX.+.sorted.bw
source_type = bigwig
display = off
colour = #263B21
[NRhind_10_plat_N_bw]
source_name = Transcripts - RNA-Seq - stationary phase (reverse strand) - Rhind (2011)
description = EuropePMC: Rhind et al 2011)
caption = Rhind (2011)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/NRhind_Transcriptome/Spom_plat_61G9EAAXX_and_61G9UAAXX.-.sorted.bw
source_type = bigwig
display = off
colour = #263B21
[GSE41773_01_GSM1024003]
source_name = Nucleosome positioning - NGS - mitosis, 972 h-, haploid (NGS) - Soriano (2013)
description = EuropePMC: Soriano et al 2013
GEO: GSE41773
caption = Soriano (2013)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE41773/GSM1024003_MN_Mit.bw
source_type = bigWig
display = off
colour = #263B21
[GSE41773_02_GSM1024004]
source_name = Nucleosome positioning - NGS - mitosis, pat1.114, diploid - Soriano (2013)
description = EuropePMC: Soriano et al 2013
GEO: GSE41773
caption = Soriano (2013)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE41773/GSM1024004_MN_Mit_pat1.114.bw
source_type = bigWig
display = off
colour = #263B21
[GSE41773_03_GSM1024000]
source_name = Nucleosome positioning - NGS - meiosis 0h, pat1.114, diploid - Soriano (2013)
description = EuropePMC: Soriano et al 2013
GEO: GSE41773
caption = Soriano (2013)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE41773/GSM1024000_MN_Mei0h.bw
source_type = bigWig
display = off
colour = #263B21
[GSE41773_04_GSM1024001]
source_name = Nucleosome positioning - NGS - meiosis 3h, pat1.114, diploid - Soriano (2013)
description = EuropePMC: Soriano et al 2013
GEO: GSE41773
caption = Soriano (2013)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE41773/GSM1024001_MN_Mei3h.bw
source_type = bigWig
display = off
colour = #263B21
[GSE41773_05_GSM1024002]
source_name = Nucleosome positioning - NGS - meiosis 5h, pat1.114, diploid - Soriano (2013)
description = EuropePMC: Soriano et al 2013
GEO: GSE41773
caption = Soriano (2013)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE41773/GSM1024002_MN_Mei5h.bw
source_type = bigWig
display = off
colour = #263B21
[GSE41773_06_GSM1023946]
source_name = Nucleosome positioning - tiling microarray - mitosis, 972 h-, haploid (tiling microarray) - Soriano (2013)
description = EuropePMC: Soriano et al 2013
GEO: GSE41773
caption = Soriano (2013)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE41773/GSM1023946_MN_Mit.bw
source_type = bigWig
display = off
colour = #263B21
[GSE41773_07_GSM1023948]
source_name = Nucleosome positioning - tiling microarray - mitosis, pcr1(delta), haploid - Soriano (2013)
description = EuropePMC: Soriano et al 2013
GEO: GSE41773
caption = Soriano (2013)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE41773/GSM1023948_MN_pcr1D.bw
source_type = bigWig
display = off
colour = #263B21
[GSE41773_08_GSM1023947]
source_name = Nucleosome positioning - tiling microarray - mitosis, atf1(delta), haploid - Soriano (2013)
description = EuropePMC: Soriano et al 2013
GEO: GSE41773
caption = Soriano (2013)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE41773/GSM1023947_MN_atf1D.bw
source_type = bigWig
display = off
colour = #263B21
#
# The following tracks have been reveresed in the description to match the data
# When reinported from GEO once corrected these values should get fixed.
#
[GSE41773_09_GSM1023953_N]
source_name = Transcripts - tiling microarray - mitosis, 972h-, haploid (forward strand) - Soriano (2013)
description = EuropePMC: Soriano et al 2013
GEO: GSE41773
caption = Soriano (2013)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE41773/GSM1023953_RNA_Mit_N.bw
source_type = bigWig
display = off
colour = #263B21
[GSE41773_10_GSM1023953_P]
source_name = Transcripts - tiling microarray - mitosis, 972h-, haploid (reverse strand) - Soriano (2013)
description = EuropePMC: Soriano et al 2013
GEO: GSE41773
caption = Soriano (2013)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE41773/GSM1023953_RNA_Mit_P.bw
source_type = bigWig
display = off
colour = #263B21
[GSE41773_11_GSM1023952_N]
source_name = Transcripts - tiling microarray - mitosis, pat1.114, diploid (forward strand) - Soriano (2013)
description = EuropePMC: Soriano et al 2013
GEO: GSE41773
caption = Soriano (2013)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE41773/GSM1023952_RNA_Mit_pat1.114_N.bw
source_type = bigWig
display = off
colour = #263B21
[GSE41773_12_GSM1023952_P]
source_name = Transcripts - tiling microarray - mitosis, pat1.114, diploid (reverse strand) - Soriano (2013)
description = EuropePMC: Soriano et al 2013
GEO: GSE41773
caption = Soriano (2013)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE41773/GSM1023952_RNA_Mit_pat1.114_P.bw
source_type = bigWig
display = off
colour = #263B21
[GSE41773_13_GSM1023949_N]
source_name = Transcripts - tiling microarray - meiosis 0h, pat1.114, diploid (forward strand) - Soriano (2013)
description = EuropePMC: Soriano et al 2013
GEO: GSE41773
caption = Soriano (2013)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE41773/GSM1023949_RNA_Mei0h_N.bw
source_type = bigWig
display = off
colour = #263B21
[GSE41773_14_GSM1023949_P]
source_name = Transcripts - tiling microarray - meiosis 0h, pat1.114, diploid (reverse strand) - Soriano (2013)
description = EuropePMC: Soriano et al 2013
GEO: GSE41773
caption = Soriano (2013)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE41773/GSM1023949_RNA_Mei0h_P.bw
source_type = bigWig
display = off
colour = #263B21
[GSE41773_15_GSM1023950_N]
source_name = Transcripts - tiling microarray - meiosis 3h, pat1.114, diploid (forward strand) - Soriano (2013)
description = EuropePMC: Soriano et al 2013
GEO: GSE41773
caption = Soriano (2013)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE41773/GSM1023950_RNA_Mei3h_N.bw
source_type = bigWig
display = off
colour = #263B21
[GSE41773_16_GSM1023950_P]
source_name = Transcripts - tiling microarray - meiosis 3h, pat1.114, diploid (reverse strand) - Soriano (2013)
description = EuropePMC: Soriano et al 2013
GEO: GSE41773
caption = Soriano (2013)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE41773/GSM1023950_RNA_Mei3h_P.bw
source_type = bigWig
display = off
colour = #263B21
[GSE41773_17_GSM1023951_N]
source_name = Transcripts - tiling microarray - meiosis 5h, pat1.114, diploid (forward strand) - Soriano (2013)
description = EuropePMC: Soriano et al 2013
GEO: GSE41773
caption = Soriano (2013)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE41773/GSM1023951_RNA_Mei5h_N.bw
source_type = bigWig
display = off
colour = #263B21
[GSE41773_18_GSM1023951_P]
source_name = Transcripts - tiling microarray - meiosis 5h, pat1.114, diploid (reverse strand) - Soriano (2013)
description = EuropePMC: Soriano et al 2013
GEO: GSE41773
caption = Soriano (2013)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE41773/GSM1023951_RNA_Mei5h_P.bw
source_type = bigWig
display = off
colour = #263B21
[GSE41773_19_GSM1023954_N]
source_name = Transcripts - tiling microarray - mitosis, atf1(delta), haploid (forward strand) - Soriano (2013)
description = EuropePMC: Soriano et al 2013
GEO: GSE41773
caption = Soriano (2013)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE41773/GSM1023954_RNA_atf1D_N.bw
source_type = bigWig
display = off
colour = #263B21
[GSE41773_20_GSM1023954_P]
source_name = Transcripts - tiling microarray - mitosis, atf1(delta), haploid (reverse strand) - Soriano (2013)
description = EuropePMC: Soriano et al 2013
GEO: GSE41773
caption = Soriano (2013)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE41773/GSM1023954_RNA_atf1D_P.bw
source_type = bigWig
display = off
colour = #263B21
[GSE41773_21_GSM1023955_N]
source_name = Transcripts - tiling microarray - mitosis, pcr1(delta), haploid (forward strand) - Soriano (2013)
description = EuropePMC: Soriano et al 2013
GEO: GSE41773
caption = Soriano (2013)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE41773/GSM1023955_RNA_pcr1D_N.bw
source_type = bigWig
display = off
colour = #263B21
[GSE41773_22_GSM1023955_P]
source_name = Transcripts - tiling microarray - mitosis, pcr1(delta), haploid (reverse strand) - Soriano (2013)
description = EuropePMC: Soriano et al 2013
GEO: GSE41773
caption = Soriano (2013)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE41773/GSM1023955_RNA_pcr1D_P.bw
source_type = bigWig
display = off
colour = #263B21
[JMatapolyAplus]
source_name = Poly(A) sites - mRNA end sequencing - 972 h- (forward strand) - Mata (2013)
description = EuropePMC: Mata 2013
caption = Mata (2013)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/JuanMata_polyA/polyA_plus.bw
source_type = bigWig
display = off
colour = #263B21
[JMatapolyAminus]
source_name = Poly(A) sites - mRNA end sequencing - 972 h- (reverse strand) - Mata (2013)
description = EuropePMC: Mata 2013)
caption = Mata (2013)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/JuanMata_polyA/polyA_minus.bw
source_type = bigWig
display = off
colour = #263B21
[MSchlackow_01_ac_P]
source_name = Poly(A) sites - RNA-Seq - all data (forward strand) - Schlackow (2013)
description = EuropePMC: Schlackow et al 2013
caption = Schlackow (2013)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/MSchlackow_polyA/All_combined_P.bw
source_type = bigWig
display = off
colour = #263B21
[MSchlackow_02_ac_N]
source_name = Poly(A) sites - RNA-Seq - all data (reverse strand) - Schlackow (2013)
description = EuropePMC: Schlackow et al 2013
caption = Schlackow (2013)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/MSchlackow_polyA/All_combined_N.bw
source_type = bigWig
display = off
colour = #263B21
[MSchlackow_03_assc_P]
source_name = Poly(A) sites - RNA-Seq - all strand-specific data (forward strand) - Schlackow (2013)
description = EuropePMC: Schlackow et al 2013
caption = Schlackow (2013)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/MSchlackow_polyA/All_strandspecific_combined_P.bw
source_type = bigWig
display = off
colour = #263B21
[MSchlackow_04_assc_N]
source_name = Poly(A) sites - RNA-Seq - all strand-specific data (reverse strand) - Schlackow (2013)
description = EuropePMC: Schlackow et al 2013
caption = Schlackow (2013)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/MSchlackow_polyA/All_strandspecific_combined_N.bw
source_type = bigWig
display = off
colour = #263B21
[MSchlackow_05_nssc_P]
source_name = Poly(A) sites - RNA-Seq - cycling, non-strand-specific, 972 h- (forward strand) - Schlackow (2013)
description = EuropePMC: Schlackow et al 2013
caption = Schlackow (2013)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/MSchlackow_polyA/Nonstrandspecific_cycling_P.bw
source_type = bigWig
display = off
colour = #263B21
[MSchlackow_06_nssc_N]
source_name = Poly(A) sites - RNA-Seq - cycling, non-strand-specific, 972 h- (reverse strand) - Schlackow (2013)
description = EuropePMC: Schlackow et al 2013
caption = Schlackow (2013)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/MSchlackow_polyA/Nonstrandspecific_cycling_N.bw
source_type = bigWig
display = off
colour = #263B21
[MSchlackow_07_ma_P]
source_name = Poly(A) sites - RNA-Seq - meiotic arrest, pat1-114 diploid (forward strand) - Schlackow (2013)
description = EuropePMC: Schlackow et al 2013
caption = Schlackow (2013)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/MSchlackow_polyA/meiosis_arrested_P.bw
source_type = bigWig
display = off
colour = #263B21
[MSchlackow_08_ma_N]
source_name = Poly(A) sites - RNA-Seq - meiotic arrest, pat1-114 diploid (reverse strand) - Schlackow (2013)
description = EuropePMC: Schlackow et al 2013
caption = Schlackow (2013)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/MSchlackow_polyA/meiosis_arrested_N.bw
source_type = bigWig
display = off
colour = #263B21
[MSchlackow_09_qa24_P]
source_name = Poly(A) sites - RNA-Seq - quiescence 24h, 972 h- (forward strand) - Schlackow (2013)
description = EuropePMC: Schlackow et al 2013
caption = Schlackow (2013)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/MSchlackow_polyA/quiescence_arrested_24h_nitrogen_depletion_P.bw
source_type = bigWig
display = off
colour = #263B21
[MSchlackow_10_qa24_N]
source_name = Poly(A) sites - RNA-Seq - quiescence 24h, 972 h- (reverse strand) - Schlackow (2013)
description = EuropePMC: Schlackow et al 2013
caption = Schlackow (2013)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/MSchlackow_polyA/quiescence_arrested_24h_nitrogen_depletion_N.bw
source_type = bigWig
display = off
colour = #263B21
[MSchlackow_11_qa7_P]
source_name = Poly(A) sites - RNA-Seq - quiescence 7d, 972 h- (forward strand) - Schlackow (2013)
description = EuropePMC: Schlackow et al 2013
caption = Schlackow (2013)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/MSchlackow_polyA/quiescence_arreseted_7days_nitrogen_depletion_P.bw
source_type = bigWig
display = off
colour = #263B21
[MSchlackow_12_qa7_N]
source_name = Poly(A) sites - RNA-Seq - quiescence 7d, 972 h- (reverse strand) - Schlackow (2013)
description = EuropePMC: Schlackow et al 2013
caption = Schlackow (2013)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/MSchlackow_polyA/quiescence_arreseted_7days_nitrogen_depletion_N.bw
source_type = bigWig
display = off
colour = #263B21
[MSchlackow_13_ssc_P]
source_name = Poly(A) sites - RNA-Seq - strand specific cycling (forward strand) - Schlackow (2013)
description = EuropePMC: Schlackow et al 2013
caption = Schlackow (2013)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/MSchlackow_polyA/Strandspecific_cycling_P.bw
source_type = bigWig
display = off
colour = #263B21
[MSchlackow_14_ssc_N]
source_name = Poly(A) sites - RNA-Seq - strand specific cycling (reverse strand) - Schlackow (2013)
description = EuropePMC: Schlackow et al 2013
caption = Schlackow (2013)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/MSchlackow_polyA/Strandspecific_cycling_N.bw
source_type = bigWig
display = off
colour = #263B21
[GSE24360_01]
source_name = Chromatin binding - DamID / tiling array - Swi6 binding sites, unfused Dam used as experimental control, repeat 1 - Woolcock (2011)
description = EuropePMC: Woolcock et al 2011
GEO: GSE24360
caption = Woolcock (2011)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_01.bw
source_type = bigWig
display = off
colour = #263B21
[GSE24360_04]
source_name = Chromatin binding - DamID / tiling array - Swi6 binding sites, clr4(delta), repeat 1 - Woolcock (2011)
description = EuropePMC: Woolcock et al 2011
GEO: GSE24360
caption = Woolcock (2011)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_02.bw
source_type = bigWig
display = off
colour = #263B21
[GSE24360_07]
source_name = Chromatin binding - DamID / tiling array - Swi6 binding sites, clr4(delta) used as experimental control, repeat 1 - Woolcock (2011)
description = EuropePMC: Woolcock et al 2011
GEO: GSE24360
caption = Woolcock (2011)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_03.bw
source_type = bigWig
display = off
colour = #263B21
[GSE24360_02]
source_name = Chromatin binding - DamID / tiling array - Swi6 binding sites, unfused Dam used as experimental control, repeat 2 - Woolcock (2011)
description = EuropePMC: Woolcock et al 2011
GEO: GSE24360
caption = Woolcock (2011)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_04.bw
source_type = bigWig
display = off
colour = #263B21
[GSE24360_05]
source_name = Chromatin binding - DamID / tiling array - Swi6 binding sites, clr4(delta), repeat 2 - Woolcock (2011)
description = EuropePMC: Woolcock et al 2011
GEO: GSE24360
caption = Woolcock (2011)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_05.bw
source_type = bigWig
display = off
colour = #263B21
[GSE24360_08]
source_name = Chromatin binding - DamID / tiling array - Swi6 binding sites, clr4(delta) used as experimental control, repeat 2 - Woolcock (2011)
description = EuropePMC: Woolcock et al 2011
GEO: GSE24360
caption = Woolcock (2011)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_06.bw
source_type = bigWig
display = off
colour = #263B21
[GSE24360_03]
source_name = Chromatin binding - DamID / tiling array - Swi6 binding sites, unfused Dam used as experimental control, repeat 3 - Woolcock (2011)
description = EuropePMC: Woolcock et al 2011
GEO: GSE24360
caption = Woolcock (2011)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_07.bw
source_type = bigWig
display = off
colour = #263B21
[GSE24360_06]
source_name = Chromatin binding - DamID / tiling array - Swi6 binding sites, clr4(delta), repeat 3 - Woolcock (2011)
description = EuropePMC: Woolcock et al 2011
GEO: GSE24360
caption = Woolcock (2011)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_08.bw
source_type = bigWig
display = off
colour = #263B21
[GSE24360_09]
source_name = Chromatin binding - DamID / tiling array - Swi6 binding sites, clr4(delta) used as experimental control, repeat 3 - Woolcock (2011)
description = EuropePMC: Woolcock et al 2011
GEO: GSE24360
caption = Woolcock (2011)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_09.bw
source_type = bigWig
display = off
colour = #263B21
[GSE24360_10]
source_name = Chromatin binding - DamID / tiling array - Swi6 binding sites, dcr1(delta), repeat 1 - Woolcock (2011)
description = EuropePMC: Woolcock et al 2011
GEO: GSE24360
caption = Woolcock (2011)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_10.bw
source_type = bigWig
display = off
colour = #263B21
[GSE24360_11]
source_name = Chromatin binding - DamID / tiling array - Swi6 binding sites, dcr1(delta), repeat 2 - Woolcock (2011)
description = EuropePMC: Woolcock et al 2011
GEO: GSE24360
caption = Woolcock (2011)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_11.bw
source_type = bigWig
display = off
colour = #263B21
[GSE24360_12]
source_name = Chromatin binding - DamID / tiling array - Dcr1 binding sites, repeat 1 - Woolcock (2011)
description = EuropePMC: Woolcock et al 2011
GEO: GSE24360
caption = Woolcock (2011)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_12.bw
source_type = bigWig
display = off
colour = #263B21
[GSE24360_15]
source_name = Chromatin binding - DamID / tiling array - Arb1 binding sites, repeat 1 - Woolcock (2011)
description = EuropePMC: Woolcock et al 2011
GEO: GSE24360
caption = Woolcock (2011)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_13.bw
source_type = bigWig
display = off
colour = #263B21
[GSE24360_13]
source_name = Chromatin binding - DamID / tiling array - Dcr1 binding sites, repeat 2 - Woolcock (2011)
description = EuropePMC: Woolcock et al 2011
GEO: GSE24360
caption = Woolcock (2011)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_15.bw
source_type = bigWig
display = off
colour = #263B21
[GSE24360_14]
source_name = Chromatin binding - DamID / tiling array - Dcr1 binding sites, repeat 3 - Woolcock (2011)
description = EuropePMC: Woolcock et al 2011
GEO: GSE24360
caption = Woolcock (2011)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_18.bw
source_type = bigWig
display = off
colour = #263B21
[GSE24360_16]
source_name = Chromatin binding - DamID / tiling array - Arb1 binding sites, repeat 2 - Woolcock (2011)
description = EuropePMC: Woolcock et al 2011
GEO: GSE24360
caption = Woolcock (2011)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_16.bw
source_type = bigWig
display = off
colour = #263B21
[GSE24360_17]
source_name = Chromatin binding - DamID / tiling array - Arb1 binding sites, repeat 3 - Woolcock (2011)
description = EuropePMC: Woolcock et al 2011
GEO: GSE24360
caption = Woolcock (2011)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_19.bw
source_type = bigWig
display = off
colour = #263B21
[GSE24360_18]
source_name = Chromatin binding - DamID / tiling array - Rdp1 binding sites, repeat 1 - Woolcock (2011)
description = EuropePMC: Woolcock et al 2011
GEO: GSE24360
caption = Woolcock (2011)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_14.bw
source_type = bigWig
display = off
colour = #263B21
[GSE24360_19]
source_name = Chromatin binding - DamID / tiling array - Rdp1 binding sites, repeat 2 - Woolcock (2011)
description = EuropePMC: Woolcock et al 2011
GEO: GSE24360
caption = Woolcock (2011)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_17.bw
source_type = bigWig
display = off
colour = #263B21
[GSE24360_20]
source_name = Chromatin binding - DamID / tiling array - Rdp1 binding sites, repeat 3 - Woolcock (2011)
description = EuropePMC: Woolcock et al 2011
GEO: GSE24360
caption = Woolcock (2011)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_20.bw
source_type = bigWig
display = off
colour = #263B21
[GSE24360_21]
source_name = Chromatin binding - DamID / tiling array - Dcr1 binding sites, clr4(delta), repeat 1 - Woolcock (2011)
description = EuropePMC: Woolcock et al 2011
GEO: GSE24360
caption = Woolcock (2011)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_21.bw
source_type = bigWig
display = off
colour = #263B21
[GSE24360_22]
source_name = Chromatin binding - DamID / tiling array - Dcr1 binding sites, clr4(delta), repeat 2 - Woolcock (2011)
description = EuropePMC: Woolcock et al 2011
GEO: GSE24360
caption = Woolcock (2011)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_23.bw
source_type = bigWig
display = off
colour = #263B21
[GSE24360_23]
source_name = Chromatin binding - DamID / tiling array - Dcr1 binding sites, clr4(delta), repeat 3 - Woolcock (2011)
description = EuropePMC: Woolcock et al 2011
GEO: GSE24360
caption = Woolcock (2011)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_26.bw
source_type = bigWig
display = off
colour = #263B21
[GSE24360_24]
source_name = Chromatin binding - DamID / tiling array - Arb1 binding sites, clr4(delta), repeat 1 - Woolcock (2011)
description = EuropePMC: Woolcock et al 2011
GEO: GSE24360
caption = Woolcock (2011)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_22.bw
source_type = bigWig
display = off
colour = #263B21
[GSE24360_25]
source_name = Chromatin binding - DamID / tiling array - Arb1 binding sites, clr4(delta), repeat 2 - Woolcock (2011)
description = EuropePMC: Woolcock et al 2011
GEO: GSE24360
caption = Woolcock (2011)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_24.bw
source_type = bigWig
display = off
colour = #263B21
[GSE24360_26]
source_name = Chromatin binding - DamID / tiling array - Arb1 binding sites, clr4(delta), repeat 3 - Woolcock (2011)
description = EuropePMC: Woolcock et al 2011
GEO: GSE24360
caption = Woolcock (2011)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_27.bw
source_type = bigWig
display = off
colour = #263B21
[GSE24360_27]
source_name = Chromatin binding - DamID / tiling array - Rdp1 binding sites, clr4(delta), repeat 1 - Woolcock (2011)
description = EuropePMC: Woolcock et al 2011
GEO: GSE24360
caption = Woolcock (2011)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_25.bw
source_type = bigWig
display = off
colour = #263B21
[GSE24360_28]
source_name = Chromatin binding - DamID / tiling array - Rdp1 binding sites, clr4(delta), repeat 2 - Woolcock (2011)
description = EuropePMC: Woolcock et al 2011
GEO: GSE24360
caption = Woolcock (2011)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_28.bw
source_type = bigWig
display = off
colour = #263B21
[GSE24360_29]
source_name = Chromatin binding - DamID / tiling array - Rdp1 binding sites, clr4(delta), repeat 3 - Woolcock (2011)
description = EuropePMC: Woolcock et al 2011
GEO: GSE24360
caption = Woolcock (2011)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/GSE24360/GSE24360_expr_M_CorV2_29.bw
source_type = bigWig
display = off
colour = #263B21
[NRhind_01_WT]
source_name = Replication origins - HT sequencing - wild type, elutriation, +HU - Xu (2012)
description = EuropePMC: Xu 2012.
caption = Xu (2012)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/NRhind_RepProfile/NRhind_WT.bw
source_type = bigWig
display = off
colour = #263B21
[NRhind_02_cdc25]
source_name = Replication origins - HT sequencing - cdc25-ts, block/release, +HU - Xu (2012)
description = EuropePMC: Xu 2012.
caption = Xu (2012)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/NRhind_RepProfile/NRhind_cdc25-22.bw
source_type = bigWig
display = off
colour = #263B21
[NRhind_03_dfp1]
source_name = Replication origins - HT sequencing - dfp1-3A, elutriation, +HU - Xu (2012)
description = EuropePMC: Xu 2012.
caption = Xu (2012)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/NRhind_RepProfile/NRhind_dfp1-3A.bw
source_type = bigWig
display = off
colour = #263B21
[ERS146817]
source_name = Transcripts - RNA-Seq - Quiescent cells (repeat 1) total RNA - Marguerat (2012)
caption = Marguerat (2012)
description = Grown for 24h in EMM medium without nitrogen source
EuropePMC: Marguerat 2012.
ArrayExpress: E-MTAB-1154.
ENA (Study): ERP001483.
ENA (Sample): .
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001483/ERS146817.bw
source_type = bigWig
display = off
colour = #263B21
[ERS146818]
source_name = Transcripts - RNA-Seq - Quiescent cells (repeat 2) total RNA - Marguerat (2012)
caption = Marguerat (2012)
description = Grown for 24h in EMM medium without nitrogen source
EuropePMC: Marguerat 2012.
ArrayExpress: E-MTAB-1154.
ENA (Study): ERP001483.
ENA (Sample): ERS146818.
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001483/ERS146818.bw
source_type = bigWig
display = off
colour = #263B21
[ERS146819]
source_name = Transcripts - RNA-Seq - Proliferating cells (repeat 1) total RNA - Marguerat (2012)
caption = Marguerat (2012)
description = Grown in log phase in EMM medium
EuropePMC: Marguerat 2012.
ArrayExpress: E-MTAB-1154.
ENA (Study): ERP001483.
ENA (Sample): ERS146819.
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001483/ERS146819.bw
source_type = bigWig
display = off
colour = #263B21
[ERS146820]
source_name = Transcripts - RNA-Seq - Quiescent cells (repeat 1) poly(A)+ RNA - Marguerat (2012)
caption = Marguerat (2012)
description = Grown for 24h in EMM medium without nitrogen source
EuropePMC: Marguerat 2012.
ArrayExpress: E-MTAB-1154.
ENA (Study): ERP001483.
ENA (Sample): ERS146820.
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001483/ERS146820.bw
source_type = bigWig
display = off
colour = #263B21
[ERS146821]
source_name = Transcripts - RNA-Seq - Proliferating cells (repeat 2) total RNA - Marguerat (2012)
caption = Marguerat (2012)
description = Grown in log phase in EMM medium
EuropePMC: Marguerat 2012.
ArrayExpress: E-MTAB-1154.
ENA (Study): ERP001483.
ENA (Sample): ERS146821.
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001483/ERS146821.bw
source_type = bigWig
display = off
colour = #263B21
[ERS146822]
source_name = Transcripts - RNA-Seq - Quiescent cells (repeat 2) poly(A)+ RNA - Marguerat (2012)
caption = Marguerat (2012)
description = Grown for 24h in EMM medium without nitrogen source
EuropePMC: Marguerat 2012.
ArrayExpress: E-MTAB-1154.
ENA (Study): ERP001483.
ENA (Sample): ERS146822.
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001483/ERS146822.bw
source_type = bigWig
display = off
colour = #263B21
[ERS146823]
source_name = Transcripts - RNA-Seq - Proliferating cells (repeat 1) poly(A)+ RNA - Marguerat (2012)
caption = Marguerat (2012)
description = Grown in log phase in EMM medium
EuropePMC: Marguerat 2012.
ArrayExpress: E-MTAB-1154.
ENA (Study): ERP001483.
ENA (Sample): ERS146823.
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001483/ERS146823.bw
source_type = bigWig
display = off
colour = #263B21
[ERS146824]
source_name = Transcripts - RNA-Seq - Proliferating cells (repeat 2) poly(A)+ RNA - Marguerat (2012)
caption = Marguerat (2012)
description = Grown in log phase in EMM medium
EuropePMC: Marguerat 2012.
ArrayExpress: E-MTAB-1154.
ENA (Study): ERP001483.
ENA (Sample): ERS146824.
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001483/ERS146824.bw
source_type = bigWig
display = off
colour = #263B21
[ERS078438]
source_name = Transcripts - RNA-Seq - run34_s3 (ERS078438) - Wilhelm (2008)
caption = Wilhelm (2008)
description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078438.bw
source_type = bigWig
display = off
colour = #263B21
[ERS078439]
source_name = Transcripts - RNA-Seq - run30_s8_Spombe_cDNA (ERS078439) - Wilhelm (2008)
caption = Wilhelm (2008)
description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078439.bw
source_type = bigWig
display = off
colour = #263B21
[ERS078440]
source_name = Transcripts - RNA-Seq - run33_s7 (ERS078440) - Wilhelm (2008)
caption = Wilhelm (2008)
description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078440.bw
source_type = bigWig
display = off
colour = #263B21
[ERS078441]
source_name = Transcripts - RNA-Seq - run34_s5 (ERS078441) - Wilhelm (2008)
caption = Wilhelm (2008)
description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078441.bw
source_type = bigWig
display = off
colour = #263B21
[ERS078442]
source_name = Transcripts - RNA-Seq - run38_s5 (ERS078442) - Wilhelm (2008)
caption = Wilhelm (2008)
description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078442.bw
source_type = bigWig
display = off
colour = #263B21
[ERS078443]
source_name = Transcripts - RNA-Seq - run33_s6 (ERS078443) - Wilhelm (2008)
caption = Wilhelm (2008)
description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078443.bw
source_type = bigWig
display = off
colour = #263B21
[ERS078444]
source_name = Transcripts - RNA-Seq - run33_s4 (ERS078444) - Wilhelm (2008)
caption = Wilhelm (2008)
description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078444.bw
source_type = bigWig
display = off
colour = #263B21
[ERS078445]
source_name = Transcripts - RNA-Seq - 67_s_5 (ERS078445) - Wilhelm (2008)
caption = Wilhelm (2008)
description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078445.bw
source_type = bigWig
display = off
colour = #263B21
[ERS078446]
source_name = Transcripts - RNA-Seq - run40_s7 (ERS078446) - Wilhelm (2008)
caption = Wilhelm (2008)
description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078446.bw
source_type = bigWig
display = off
colour = #263B21
[ERS078447]
source_name = Transcripts - RNA-Seq - run38_s6 (ERS078447) - Wilhelm (2008)
caption = Wilhelm (2008)
description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078447.bw
source_type = bigWig
display = off
colour = #263B21
[ERS078448]
source_name = Transcripts - RNA-Seq - 67_s_2 (ERS078448) - Wilhelm (2008)
caption = Wilhelm (2008)
description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078448.bw
source_type = bigWig
display = off
colour = #263B21
[ERS078449]
source_name = Transcripts - RNA-Seq - run33_s5 (ERS078449) - Wilhelm (2008)
caption = Wilhelm (2008)
description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078449.bw
source_type = bigWig
display = off
colour = #263B21
[ERS078450]
source_name = Transcripts - RNA-Seq - run34_s1 (ERS078450) - Wilhelm (2008)
caption = Wilhelm (2008)
description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078450.bw
source_type = bigWig
display = off
colour = #263B21
[ERS078451]
source_name = Transcripts - RNA-Seq - run33_s3 (ERS078451) - Wilhelm (2008)
caption = Wilhelm (2008)
description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078451.bw
source_type = bigWig
display = off
colour = #263B21
[ERS078452]
source_name = Transcripts - RNA-Seq - IL2_22_SPombe (ERS078452 - Wilhelm (2008)
caption = Wilhelm (2008)
description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078452.bw
source_type = bigWig
display = off
colour = #263B21
[ERS078453]
source_name = Transcripts - RNA-Seq - ILease15_16Spombe_cDNA (ERS078453) - Wilhelm (2008)
caption = Wilhelm (2008)
description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078453.bw
source_type = bigWig
display = off
colour = #263B21
[ERS078454]
source_name = Transcripts - RNA-Seq - run38_s4 (ERS078454) - Wilhelm (2008)
caption = Wilhelm (2008)
description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078454.bw
source_type = bigWig
display = off
colour = #263B21
[ERS078455]
source_name = Transcripts - RNA-Seq - run34_s4 (ERS078455) - Wilhelm (2008)
caption = Wilhelm (2008)
description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078455.bw
source_type = bigWig
display = off
colour = #263B21
[ERS078456]
source_name = Transcripts - RNA-Seq - run38_s7 (ERS078456) - Wilhelm (2008)
caption = Wilhelm (2008)
description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078456.bw
source_type = bigWig
display = off
colour = #263B21
[ERS078457]
source_name = Transcripts - RNA-Seq - run38_s1 (ERS078457) - Wilhelm (2008)
caption = Wilhelm (2008)
description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078457.bw
source_type = bigWig
display = off
colour = #263B21
[ERS078458]
source_name = Transcripts - RNA-Seq - run33_s1 (ERS078458) - Wilhelm (2008)
caption = Wilhelm (2008)
description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078458.bw
source_type = bigWig
display = off
colour = #263B21
[ERS078459]
source_name = Transcripts - RNA-Seq - run30_s7_Spombe_cDNA (ERS078459) - Wilhelm (2008)
caption = Wilhelm (2008)
description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078459.bw
source_type = bigWig
display = off
colour = #263B21
[ERS078460]
source_name = Transcripts - RNA-Seq - run40_s8 (ERS078460) - Wilhelm (2008)
caption = Wilhelm (2008)
description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078460.bw
source_type = bigWig
display = off
colour = #263B21
[ERS078461]
source_name = Transcripts - RNA-Seq - 67_s_3 (ERS078461) - Wilhelm (2008)
caption = Wilhelm (2008)
description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078461.bw
source_type = bigWig
display = off
colour = #263B21
[ERS078462]
source_name = Transcripts - RNA-Seq - run34_s2 (ERS078462) - Wilhelm (2008)
caption = Wilhelm (2008)
description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078462.bw
source_type = bigWig
display = off
colour = #263B21
[ERS078463]
source_name = Transcripts - RNA-Seq - run33_s2 (ERS078463) - Wilhelm (2008)
caption = Wilhelm (2008)
description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078463.bw
source_type = bigWig
display = off
colour = #263B21
[ERS078464]
source_name = Transcripts - RNA-Seq - run38_s8 (ERS078464) - Wilhelm (2008)
caption = Wilhelm (2008)
description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078464.bw
source_type = bigWig
display = off
colour = #263B21
[ERS078465]
source_name = Transcripts - RNA-Seq - run38_s3 (ERS078465) - Wilhelm (2008)
caption = Wilhelm (2008)
description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078465.bw
source_type = bigWig
display = off
colour = #263B21
[ERS078466]
source_name = Transcripts - RNA-Seq - 67_s_1 (ERS078466) - Wilhelm (2008)
caption = Wilhelm (2008)
description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078466.bw
source_type = bigWig
display = off
colour = #263B21
[ERS078467]
source_name = Transcripts - RNA-Seq - run38_s2 (ERS078467) - Wilhelm (2008)
caption = Wilhelm (2008)
description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078467.bw
source_type = bigWig
display = off
colour = #263B21
[ERS078468]
source_name = Transcripts - RNA-Seq - 67_s_6 (ERS078468) - Wilhelm (2008)
caption = Wilhelm (2008)
description = High throughput sequenceing of fission yeast to survey the dynamic repertoire of a eukaryotic transcriptome at the single nucleotide resolution (Study ERP001075)
EuropePMC: Wilhelm 2012
ArrayExpress: E-MTAB-5
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/ERP001075/ERS078468.bw
source_type = bigWig
display = off
colour = #263B21
[ENSEMBL_INTERNAL_BED_SOURCES]
Bitton_IBP_24709818 = pb_intron_branch_point
RNAcentral = transcript
[Bitton_IBP_24709818]
source_name = Intron Branch Point - RNA-Seq - all data - Bitton (2014)
description = EuropePMC: Bitton et al 2014
caption = Bitton (2014)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/Bitton_IBP_24709818/BranchPoint_v2.bed
source_type = bed
display = off
colour = #263B21
[ENSEMBL_INTERNAL_BAM_SOURCES]
NRhind_01_all_P = transcriptome
NRhind_02_all_N = transcriptome
NRhind_03_log_P = transcriptome
NRhind_04_log_N = transcriptome
NRhind_05_ds_P = transcriptome
NRhind_06_ds_N = transcriptome
NRhind_07_hs_P = transcriptome
NRhind_08_hs_N = transcriptome
NRhind_09_plat_P = transcriptome
NRhind_10_plat_N = transcriptome
[NRhind_01_all_P]
source_name = Transcripts - RNA-Seq - all data (forward strand) - Rhind (2011)
description = EuropePMC: Rhind et al 2011)
caption = Rhind (2011)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/NRhind_Transcriptome/Spom_all_61G9EAAXX_and_61G9UAAXX.+.sorted.bam
source_type = rnaseq
display = off
colour = #263B21
[NRhind_02_all_N]
source_name = Transcripts - RNA-Seq - all data (reverse strand) - Rhind (2011)
description = EuropePMC: Rhind et al 2011)
caption = Rhind (2011)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/NRhind_Transcriptome/Spom_all_61G9EAAXX_and_61G9UAAXX.-.sorted.bam
source_type = rnaseq
display = off
colour = #263B21
[NRhind_03_log_P]
source_name = Transcripts - RNA-Seq - log phase (forward strand) - Rhind (2011)
description = EuropePMC: Rhind et al 2011)
caption = Rhind (2011)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/NRhind_Transcriptome/Spom_log_61G9EAAXX_and_61G9UAAXX.+.sorted.bam
source_type = rnaseq
display = off
colour = #263B21
[NRhind_04_log_N]
source_name = Transcripts - RNA-Seq - log phase (reverse strand) - Rhind (2011)
description = Log Phase mapped to the forward strand as described by Rhind et al 2011)
caption = Rhind (2011)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/NRhind_Transcriptome/Spom_log_61G9EAAXX_and_61G9UAAXX.-.sorted.bam
source_type = rnaseq
display = off
colour = #263B21
[NRhind_05_ds_P]
source_name = Transcripts - RNA-Seq - glucose depletion (forward strand) - Rhind (2011)
description = EuropePMC: Rhind et al 2011)
caption = Rhind (2011)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/NRhind_Transcriptome/Spom_ds_61G9EAAXX_and_61G9UAAXX.+.sorted.bam
source_type = rnaseq
display = off
colour = #263B21
[NRhind_06_ds_N]
source_name = Transcripts - RNA-Seq - glucose depletion (reverse strand) - Rhind (2011)
description = EuropePMC: Rhind et al 2011)
caption = Rhind (2011)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/NRhind_Transcriptome/Spom_ds_61G9EAAXX_and_61G9UAAXX.-.sorted.bam
source_type = rnaseq
display = off
colour = #263B21
[NRhind_07_hs_P]
source_name = Transcripts - RNA-Seq - heat shock (forward strand) - Rhind (2011)
description = EuropePMC: Rhind et al 2011)
caption = Rhind (2011)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/NRhind_Transcriptome/Spom_hs_61G9EAAXX_and_61G9UAAXX.+.sorted.bam
source_type = rnaseq
display = off
colour = #263B21
[NRhind_08_hs_N]
source_name = Transcripts - RNA-Seq - heat shock (reverse strand) - Rhind (2011)
description = EuropePMC: Rhind et al 2011)
caption = Rhind (2011)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/NRhind_Transcriptome/Spom_hs_61G9EAAXX_and_61G9UAAXX.-.sorted.bam
source_type = rnaseq
display = off
colour = #263B21
[NRhind_09_plat_P]
source_name = Transcripts - RNA-Seq - stationary phase (forward strand) - Rhind (2011)
description = EuropePMC: Rhind et al 2011)
caption = Rhind (2011)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/NRhind_Transcriptome/Spom_plat_61G9EAAXX_and_61G9UAAXX.+.sorted.bam
source_type = rnaseq
display = off
colour = #263B21
[NRhind_10_plat_N]
source_name = Transcripts - RNA-Seq - stationary phase (reverse strand) - Rhind (2011)
description = EuropePMC: Rhind et al 2011)
caption = Rhind (2011)
source_url = http://ftp.ebi.ac.uk/pub/databases/pombase/DATASET/NRhind_Transcriptome/Spom_plat_61G9EAAXX_and_61G9UAAXX.-.sorted.bam
source_type = rnaseq
display = off
colour = #263B21