domain ID subset relation extension relation range ID Canto display text Help text cardinality role FYPO:0000002 is_a|has_part has_penetrance FYPO_EXT:1000002|% penetrance proportion of the population that shows the phenotype (can be quantitative or qualitative) 0,1 user #FYPO:0000002 is_a has_penetrance FYPO_EXT:0000001|FYPO_EXT:0000002|FYPO_EXT:0000003|FYPO_EXT:0000004|% penetrance 0,1 user FYPO:0000063 is_a assayed_using SO:0001411-SO:0000839 assayed region 0,1 user #FYPO:0000142 is_a assayed_using GeneID|TranscriptID|ProteinID assayed gene/transcript/protein 0,1 user FYPO:0000143 is_a assayed_using TranscriptID|SO:0000110 assayed transcription of 0,1 user FYPO:0000213 is_a assayed_using ProteinID assayed protein 0,1 user FYPO:0000280 is_a has_penetrance FYPO_EXT:1000002|% penetrance 0,1 user FYPO:0000294 is_a assayed_using TranscriptID|SO:0000673 assayed transcript 0,1 user FYPO:0000591 is_a assayed_using SO:0000101 assayed transposon type 0,1 user FYPO:0000601 is_a assayed_using ProteinID assayed protein 0,1 user FYPO:0000642 is_a assayed_using GeneID|SO:0001411-SO:0000839 assayed gene or region 0,1 user FYPO:0000653 is_a assayed_using SO:0000110 assayed region 0,1 user #FYPO:0000653 is_a assayed_using ProteinID assayed protein 0,1 user FYPO:0000654 is_a assayed_enzyme ProteinID assayed enzyme 0,1 user FYPO:0000654 is_a assayed_substrate TranscriptID|ProteinID assayed substrate (RNA or protein only) 0,1 user FYPO:0000682-is_a(FYPO:0004916) is_a assayed_using ProteinID assayed enzyme 0,1 user FYPO:0000702 is_a assayed_using ProteinID affected proteins (add TWO, i.e. both binding partners) 2 user #FYPO:0000824 is_a assayed_using TranscriptID|SO:0000286|SO:0000673 assayed transcript 0,1 user FYPO:0000824 is_a assayed_using TranscriptID|SO:0000673 assayed transcript For a general transcript type, such as 'rRNA', 'tRNA', 'centromere outer repeat transcript' type text in the text box. For a specific gene, select the 'Gene' radio button and then choose a gene from the pulldown menu. or 0,1 user FYPO:0000834 is_a assayed_using ProteinID assayed protein 0,1 user FYPO:0000840 is_a assayed_using TranscriptID|SO:0000673 assayed transcript 0,1 user FYPO:0001092-is_a(FYPO:0000702) is_a assayed_using ProteinID assayed protein 0,1 user FYPO:0001945 is_a assayed_using ProteinID assayed protein 0,1 user FYPO:0001985-is_a(FYPO:0005448)&is_a(FYPO:0005449) is_a|has_part has_expressivity FYPO_EXT:1000001 expressivity 0,1 user #FYPO:0001985 is_a has_expressivity FYPO_EXT:0000001|FYPO_EXT:0000002|FYPO_EXT:0000003|FYPO_EXT:0000005 expressivity severity of the phenotype 0,1 user FYPO:0002114 is_a assayed_using ProteinID assayed protein 0,1 user FYPO:0002131 is_a assayed_using TranscriptID|SO:0000673 assayed transcript 0,1 user FYPO:0002274 is_a assayed_using ProteinID assayed protein 0,1 user FYPO:0002333 is_a assayed_using ProteinID assayed protein 0,1 user FYPO:0002576 is_a assayed_using SO:0001411-SO:0000839 assayed region 0,1 user FYPO:0002671 is_a assayed_using ProteinID assayed protein 0,1 user FYPO:0002891 is_a assayed_using GeneID|SO:0001411-SO:0000839 assayed region 0,1 user FYPO:0002928 is_a assayed_using TranscriptID assayed transcript 0,1 user FYPO:0002929 is_a assayed_using TranscriptID assayed transcript 0,1 user FYPO:0002934 is_a assayed_using TranscriptID assayed transcript 0,1 user FYPO:0003038 is_a assayed_using TranscriptID|SO:0000673 assayed transcript 0,1 user FYPO:0003048 is_a assayed_using TranscriptID|SO:0000673 assayed transcript 0,1 user FYPO:0003050 is_a assayed_using SO:0001411-SO:0000839 assayed region 0,1 user #FYPO:0003059 is_a assayed_using TranscriptID|SO:0000673 assayed transcript 0,1 user should be redundant FYPO:0003086 is_a assayed_using ProteinID assayed protein 0,1 user FYPO:0003086 is_a assayed_using SO:0001411-SO:0000839 assayed region 0,1 user FYPO:0003452 is_a assayed_using ProteinID assayed protein 0,1 user FYPO:0003578 is_a assayed_using ProteinID assayed protein 0,1 user FYPO:0003886 is_a assayed_using GeneID|ProteinID assayed gene/protein 0,1 user FYPO:0004038 is_a assayed_using TranscriptID|SO:0000673 assayed transcript 0,1 user FYPO:0004083 is_a assayed_using ProteinID assayed protein 0,1 user FYPO:0004847 is_a assayed_using TranscriptID|SO:0000110 assayed transcription of 0,1 user FYPO:0004849 is_a assayed_using ProteinID assayed protein 0,1 user FYPO:0004850 is_a assayed_using TranscriptID|SO:0000673 assayed transcript 0,1 user FYPO:0004851 is_a assayed_using TranscriptID|SO:0000673 assayed transcript 0,1 user FYPO:0004853 is_a assayed_using TranscriptID|SO:0000673 assayed transcript 0,1 user FYPO:0004916 is_a assayed_enzyme ProteinID assayed enzyme 0,1 user FYPO:0004916 is_a assayed_substrate TranscriptID|ProteinID assayed substrate (RNA or protein only) 0,1 user FYPO:0004920 is_a assayed_enzyme ProteinID assayed enzyme 0,1 user FYPO:0004920 is_a assayed_substrate TranscriptID|ProteinID assayed substrate (RNA or protein only) 0,1 user FYPO:0004988 is_a assayed_using TranscriptID|SO:0000673 assayed transcript For a general transcript type, such as 'rRNA', 'tRNA', 'centromere outer repeat transcript' type text in the text box. For a specific gene, select the 'Gene' radio button and then choose a gene from the pulldown menu. or 0,1 user FYPO:0005493 is_a assayed_using ProteinID assayed protein 0,1 user FYPO:0005800 is_a assayed_using ProteinID assayed protein 0,1 user FYPO:0005807 is_a assayed_using ProteinID assayed protein 0,1 user FYPO:0005904 is_a assayed_using ProteinID assayed protein 0,1 user FYPO:0000063 is_a assayed_using GeneID assayed gene 0,1 admin FYPO:0000137 is_a assayed_using ProteinID assayed protein 0,1 admin FYPO:0000654 is_a assayed_enzyme GO:0032991 assayed enzyme complex 0,1 admin # use commented-out version if we ever move to a setup where admin overrides user for a given domain (canto #1068) #FYPO:0000654 is_a assayed_substrate TranscriptID|ProteinID|GO:0032991|SO:0000673 assayed substrate (RNA, protein or complex only) 0,1 admin FYPO:0000654 is_a assayed_substrate GO:0032991 assayed substrate (protein complex only) 0,1 admin FYPO:0000834 is_a assayed_using GO:0032991 assayed protein complex 0,1 admin FYPO:0001092-is_a(FYPO:0000702) is_a assayed_using GO:0032991 assayed binding between 0,2 admin FYPO:0000217 is_a assayed_using GeneID|SO:0001411 assayed region 0,1 admin FYPO:0002333 is_a assayed_using GO:0032991 assayed protein complex 0,1 admin FYPO:0004083 is_a assayed_using GO:0032991 assayed protein complex 0,1 admin FYPO:0000741 is_a is_bearer_of PATO:0000014 color 0,1 admin FYPO:0000824-is_a(FYPO:0002934) is_a assayed_using SO:0000286 assayed transcript 0,1 admin FYPO:0000702 is_a assayed_using Text affected protein isoforms (add TWO, i.e. both binding partners) 0,1,2 admin FYPO:0000834 is_a assayed_using Text assayed protein isoform 0,1 admin FYPO:0002274 is_a assayed_using Text assayed protein isoform 0,1 admin FYPO:0002333 is_a assayed_using Text assayed protein isoform 0,1 admin FYPO:0002494 is_a residue Text position of affected modification, e.g. K23 0,1 admin FYPO:0002495 is_a residue Text position of affected modification, e.g. K23 0,1 admin FYPO:0002671 is_a assayed_using Text assayed protein isoform 0,1 admin FYPO:0003452 is_a assayed_using Text assayed protein isoform 0,1 admin FYPO:0004083 is_a assayed_using Text assayed protein isoform 0,1 admin FYPO:0004849 is_a assayed_using Text assayed protein isoform 0,1 admin