Index of /monthly_releases/2025/pombase-2025-04-01/protein_features

 Name                                       Last modified      Size  Description
 Parent Directory                                                -   
 aa_composition.tsv                         2025-04-01 02:00  333K  
 disordered_regions.tsv                     2025-04-01 02:00  154K  
 peptide_stats.tsv                          2025-04-01 02:00  190K  
 protein_families_and_domains.tsv           2025-04-01 02:00  3.5M  
 protein_modifications.tsv                  2025-04-01 02:00  9.3M  

The directory contains files describing various features of S. pombe proteins:

- aa_composition.tsv describes the amino acid composition, in number of
  residues, of all S. pombe proteins.

- disordered_regions.tsv lists the disordered regions of proteins and
  their coordinates.

- peptide_stats.tsv lists the protein properties that can be found
  in the "Protein domains and properties" section of the gene pages
  on PomBase: predicted molecular weight (kDa), predicted isoelectric point,
  charge at pH7, length ("Residues") and codon adaptation index (CAI).

- protein_families_and_domains.tsv describes protein features such as domains and
  family assignments that can be visualised in the "Protein domains and properties"
  section of the gene pages on PomBase. For more detail
  see https://www.pombase.org/documentation/gene-page-protein-features

- protein_modifications.tsv lists all the protein modifications annotations
  currently featured in PomBase.
  See https://www.pombase.org/documentation/modification-data-bulk-upload-format
  for a description of the column contents.

These files are part of PomBase release 2025-04-01

For use of this dataset please cite:
  Kim Rutherford, Manuel Lera-Ramírez, Valerie Wood
  PomBase: a Global Core Biodata Resource - growth, collaboration, and sustainability
  Genetics, February 2024
  https://doi.org/10.1093/genetics/iyae007