Index of /monthly_releases/2025/pombase-2025-04-01/genome_sequence_and_features

Icon  Name                                       Last modified      Size  Description
[PARENTDIR] Parent Directory - [DIR] artemis_contigs/ 2025-04-01 02:00 - [DIR] fasta_format/ 2025-04-01 02:00 - [DIR] feature_coordinates/ 2025-04-01 02:00 - [DIR] gff_format/ 2025-04-01 02:00 -
These directories contain sequences for genes, transcripts, proteins
and whole chromosomes along with feature coordinates in several
formats.

 - artemis_contigs
   chromosome sequence and features in enriched EMBL-based format for
   loading into Artemis, annotated by PomBase

 - fasta_format
   files in fasta format for: chromosome, gene, exon, intron,
   transcript and protein sequences

 - feature_coordinates
   per chromosome files in Tab Separated Values (TSV) format
   containing coding sequence (CDS), gene and exon locations

 - gff_format
   gene features files in GFF3 format for each chromosome, and separates files
   for forward and reverse strand features

These files are part of PomBase release 2025-04-01

For use of this dataset please cite:
  Kim Rutherford, Manuel Lera-Ramírez, Valerie Wood
  PomBase: a Global Core Biodata Resource - growth, collaboration, and sustainability
  Genetics, February 2024
  https://doi.org/10.1093/genetics/iyae007