Index of /monthly_releases/2025/pombase-2025-02-01/human_disease_annotation

 Name                                       Last modified      Size  Description
 Parent Directory                                                -   
 human_disease_association.tsv              2025-02-01 01:00  161K  
 pombe_mondo_disease_slim_terms.tsv         2025-02-01 01:00  1.4K  

This directory contains files related to the association of
S. pombe genes with human diseases, curated by PomBase.

The human_disease_association.tsv file lists the S. pombe genes with
human orthologs associated to human diseases and the Mondo identifiers
of the associated diseases.
Columns:
  - gene systematic ID
  - gene name
  - Mondo disease ontology term ID (see https://mondo.monarchinitiative.org/)
  - reference, can be a PB_REF ("PomBase reference") or a PubMed ID
  - annotation date

PB_REFs are describedhere: https://www.pombase.org/documentation/pombase-references

The pombe_mondo_disease_slim_terms.tsv file lists the human disease slim
terms currently used in PomBase.
See: https://www.pombase.org/browse-curation/disease-slim

"slims" are subsets of an ontology that provide a broad overview of
annotation distribution. The disease slim set uses Mondo ontology terms
from the Monarch Initiative: https://mondo.monarchinitiative.org/

These files are part of PomBase release 2025-02-01

For use of this dataset please cite:
  Kim Rutherford, Manuel Lera-Ramírez, Valerie Wood
  PomBase: a Global Core Biodata Resource - growth, collaboration, and sustainability
  Genetics, February 2024
  https://doi.org/10.1093/genetics/iyae007

Please also cite The Monarch Initiative:
  https://monarchinitiative.org/cite
and/or Mondo:
  "Mondo: Unifying diseases for the world, by the world"
  NA Vasilevsky et al.
  https://doi.org/10.1101/2022.04.13.22273750