Index of /monthly_releases/2025/pombase-2025-02-01/gene_names_and_identifiers

Icon  Name                                       Last modified      Size  Description
[PARENTDIR] Parent Directory - [TXT] gene_IDs_names_products.tsv 2025-02-01 01:00 1.2M
This directory contains a single tab-separated value file mapping the
PomBase systematic identifiers to the associated gene names and gene products.

This file is composed of 8 columns:
  - gene_systematic_id: PomBase systematic identifier (eg. SPAC1039.10)
  - gene_systematic_id_with_prefix: systematic ID with prefix (eg. PomBase:SPAC1039.10)
  - gene_name: main gene symbol (eg. mmf2)
  - chromosome_id: chromosome on which the gene is located (eg. chromosome_1)
  - gene_product: description of the gene product (eg. mitochondrial matrix protein,
                  YjgF family protein Mmf2, reactive intermediate imine deaminase A homolog)
  - uniprot_id: UniProt accession number, for protein-coding genes only (eg. Q9UR06)
  - gene_type: PomBase feature type (eg. protein coding gene)
  - synonyms: other gene names used in the literature (eg. hpm1,SPAC922.01)

This file is part of PomBase release 2025-02-01

For use of this dataset please cite:
  Kim Rutherford, Manuel Lera-Ramírez, Valerie Wood
  PomBase: a Global Core Biodata Resource - growth, collaboration, and sustainability
  Genetics, February 2024
  https://doi.org/10.1093/genetics/iyae007