Index of /monthly_releases/2025/pombase-2025-02-01/curated_orthologs
Name Last modified Size Description
Parent Directory -
pombe_cerevisiae_orthologs.txt 2025-02-01 01:00 108K
pombe_human_orthologs.txt 2025-02-01 01:00 103K
pombe_japonicus_orthologs.txt 2025-02-01 01:00 115K
This directory contains text files listing the orthologs of S. pombe genes in other species,
manually curated by PomBase, specifically:
- S. pombe gene orthologs in S. cerevisiae
- S. pombe gene orthologs in human
- S. pombe gene orthologs in S. japonicus
Each file is composed of five columns:
- S. pombe systematic identifier (eg. SPAC1002.08c)
- S. cerevisiae/human gene symbol/S. japonicus systematic identifier
(eg. CDC28,TFB1M|TFB2M or SJAG_03289)
- A qualifier used to describe gene fusion events where a single gene in one species maps to 2 separate genes in the other species
- A reference (not mandatory)
- Date added (not mandatory)
When multiple orthologs exist for a single S. pombe gene, their identifiers are
separated by vertical line symbols: "|"
These files are part of PomBase release 2025-02-01
For use of this dataset please cite:
Kim Rutherford, Manuel Lera-RamÃrez, Valerie Wood
PomBase: a Global Core Biodata Resource - growth, collaboration, and sustainability
Genetics, February 2024
https://doi.org/10.1093/genetics/iyae007