ID SPCC4E9 standard; DNA; FUN; 4605 BP. XX AC AL121720; XX SV AL121720.1 XX DT 01-OCT-1999 (Rel. 61, Created) DT 01-OCT-1999 (Rel. 61, Last updated, Version 1) XX DE S.pombe chromosome III cosmid c4E9. XX KW cig1; g2/mitotic-specific cyclin; meiotic recombination protein; rec11. XX OS Schizosaccharomyces pombe (fission yeast) OC Eukaryota; Fungi; Ascomycota; Schizosaccharomycetes; OC Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces. XX RN [1] RP 1-4605 RA Devlin K., Churcher C., McDougall R.C., Rajandream M.A., Barrell B.G.; RT ; RL Submitted (17-OCT-1999) to the EMBL/GenBank/DDBJ databases. RL European Schizosaccharomyces genome sequencing project, Sanger Centre, The RL Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, E-mail: RL barrell@sanger.ac.uk. XX DR GOA; P24865; P24865. DR GOA; Q92380; Q92380. DR SWISS-PROT; P24865; CG21_SCHPO. DR SWISS-PROT; Q92380; RE11_SCHPO. XX CC Notes: CC Details of yeast sequencing at the Sanger Centre are available on CC the World Wide Web. CC (URL, http://www.sanger.ac.uk/Projects/S_pombe/) CC During 1995 to 1996 about 66% of S. pombe chromosome 1 was sequenced CC by the Sanger Centre. The sequencing of the S. pombe genome is now CC being continued with funding from The European Commission. CC Fourteen European sequencing laboratories, including the Sanger Centre, CC are participating in the project. CC Protein coding regions (CDS) have been predicted with the help CC of computer analysis using the Genefinder program in PomBase CC (an ACEDB database) with additional predictions for the CC branch-acceptor sites supplied by the program Sp3splice. CC CAUTION: It is possible that for any individual CDS we may have CC underestimated or overestimated the number of introns/exons or CC we may not have chosen the correct splice donor/acceptor sites. CC CDS are numbered using the following system eg SPBC25H2.01c. CC SP (S. pombe), B (chromosome 2), c25H2 (cosmid name), CC .01 (first CDS), c (complementary strand). CC The more significant matches with motifs in the PROSITE CC database are also included but some of these may be fortuitous. CC The length in codons is given for each CDS. CC IMPORTANT: This sequence MAY NOT be the entire insert of CC the sequenced clone. It may be shorter because we only CC sequence overlapping sections once, or longer, because we CC arrange for a small overlap between neighbouring submissions. CC Cosmid c4E9 is overlapped at the 5' end by cosmid c550 and at CC the 3' end by cosmid c645. XX FH Key Location/Qualifiers FH FT source 1..4605 FT /chromosome="III" FT /db_xref="taxon:4896" FT /organism="Schizosaccharomyces pombe" FT /strain="972h-" FT /clone="cosmid c4E9" FT /map="IIIR" FT misc_feature 1..99 FT /note="nominal overlap with cosmid SPCC550 S. pombe FT chromosome 3" FT CDS join(complement(2791..3055),complement(2612..2724), FT complement(2428..2526),complement(2029..2378), FT complement(1840..1984),complement(1000..1782), FT complement(547..962),complement(218..503), FT complement(1..130)) FT /db_xref="GOA:Q92380" FT /db_xref="SWISS-PROT:Q92380" FT /label=rec11 FT /note="SPCC4E9.01c, len:862" FT /partial FT /gene="rec11" FT /gene="SPCC4E9.01c" FT /gene="SPCC550.16c" FT /product="meiotic recombination protein rec11" FT /protein_id="CAB57299.1" FT /translation="MRFEFESDASSHLNEVLTELESVELENVEYEGPSLQNVSICASPS FT EKKRKWGTQDEFSLTENEENNEIETNEEMHVNSHDYAFPQEFFLKLLDIDMPLEQLSQH FT YFEDYKSNSADFMLTFINFALVASGCQPFVTNFDVQDVDSIPETLSQVNRSSFQKSSCA FT YTDYLYTSNSKEAKTVRIRFQLFLVEFISKVYVEDAFLGDSFMETTKAWIFTMTTSPWM FT LVRHTATTICCDIMRCLCLIVNKLSEKSNQTAEILVLRDLTSRFIDMIHDICDSVLFSR FT IHDIRASIRIVCVTALYDCCQLLPTYLINRNLIRHSGWGLSDAESQIRKISLKIIDYLS FT SHEPEKDQDFVVDFLDRFSLRIVEICRYDIDSVRSVALKTCEKLMEKISLNGKCINIVS FT SCIFDGKPQNRISTMRILVAHTNERYANYCEAKTATISLSKLLRREKIPLLVSSFESLF FT KMNALLFILEQGFESWFRDSSDHIFSRVKDDDKFVYQSQENNFYDADFIREYDMNNHRQ FT QLIEESMHSIHTNSQLLASWEDVAKLLLYDRFDAKDTNSVLNPCIPSNAVIEFSSIYLH FT YFATHISKRSKKPGKRLEDEVVNQQQAMLRNLPLLLQKYRESCVSSYFFIKCVEQIPDE FT LLYKREFHKDFSKLYKEILDIFNSTTVNFLMILCSRFFHRLAVNKVVQEDILFAIDNVY FT NDLAESLHEQLNAYIQRKKINKKNQLNGNDETQNLVLALNKFGCFAKEMVCLRDVNDWN FT IKLSEKLCEICSLEVGPIVCYSSLKVLFLLLLSDMRDRNCIFTNIFLKAAKVAKQKNGN FT SFLSKVFITITMLTLFLGSKANNWDINFSDDDLKLMNEEEIMEQIETFKA" FT misc_feature complement(131..144) FT /note="ctaactataagcag, splice branch and acceptor" FT misc_feature complement(212..217) FT /note="gtaagt, splice donor sequence" FT misc_feature complement(504..516) FT /note="ctaactttacaag, splice branch and acceptor" FT misc_feature complement(541..546) FT /note="gtaagg, splice donor sequence" FT misc_feature complement(963..974) FT /note="ctaaacctctag, splice branch and acceptor" FT misc_feature complement(994..999) FT /note="gtaagt, splice donor sequence" FT misc_feature complement(1783..1798) FT /note="ctaactgaacgtatag, splice branch and acceptor" FT misc_feature complement(1834..1839) FT /note="gtaagt, splice donor sequence" FT misc_feature complement(1985..2000) FT /note="ctaacctttttactag, splice branch and acceptor" FT misc_feature complement(2023..2028) FT /note="gttggc, splice donor sequence" FT misc_feature complement(2379..2398) FT /note="cttaccatacatatcgctag, splice branch and acceptor" FT misc_feature complement(2422..2427) FT /note="gtgtgt, splice donor sequence" FT misc_feature complement(2527..2537) FT /note="ctaattcatag, splice branch and acceptor" FT misc_feature complement(2606..2611) FT /note="gtaagt, splice donor sequence" FT misc_feature complement(2725..2743) FT /note="ctaacaagcatacgaaaag, splice branch and acceptor" FT misc_feature complement(2785..2790) FT /note="gtaagt, splice donor sequence" FT misc_feature 3565..4605 FT /note="nominal overlap with cosmid SPCC645 S. pombe FT chromosome 3" FT CDS 3675..4605 FT /db_xref="GOA:P24865" FT /db_xref="SWISS-PROT:P24865" FT /label=cig1 FT /note="SPCC4E9.02, len:310" FT /partial FT /gene="cig1" FT /gene="SPCC4E9.02" FT /gene="SPCC645.01" FT /product="g2/mitotic-specific cyclin cig1p" FT /protein_id="CAB57300.1" FT /translation="MDVSTQTRHATYFQDENQLQKDHIYVKKKSHIKLNTGVRAPFKAV FT DNINQQDEPTLIEGNNESSISSSTGDTFEEDFAYQDKVEIEERSIRSTPKSIGDDDLEN FT REGSFDAPEGILTHGKHRLPTIPEWTKEDLAALSEAAARLQANPSPEDIETDPSMVPDY FT DPEIFHYMQSLERKLAPPPNYMSVQQEIDWVTRHMLVDWIVQVQIHFRLLPETLFLAVN FT LIDRFLSIKVVSLQKVQLVGLSALLIACKYEEIHPPSIYNFAHVVQGIFTVDEIIRAER FT YMLMLLDFDISWPGPMSFLRRISRADSYD" FT misc_feature 4113..4604 FT /note="Pfam match to entry PF00134 cyclin, Cyclin," XX SQ Sequence 4605 BP; 1441 A; 865 C; 816 G; 1483 T; 0 other; atgctttaaa agtttcaatt tgttccatga tttcttcttc attcatcaat ttcaagtcat 60 cgtcactaaa atttatatcc caattatttg cctttgatcc aagaaacaat gtaagcatcg 120 taattgtaat ctgcttatag ttagcatttt actccactaa atgtgattga aatcaacagt 180 cataaaagat agatagacag caacattaga gacttacgaa aactttgctt aaaaaggagt 240 ttccattttt ttgcttcgca accttagctg cttttaaaaa tatatttgta aaaatacagt 300 ttctatctct catatcagaa agcagaagaa gaaataaaac tttcaaagaa gaataacaga 360 cgataggacc gacttcaaga ctacaaattt cgcataattt ttctgacagt ttaatgttcc 420 aatcattgac gtctcgcaga cagaccattt cctttgcaaa gcatccaaac ttatttaaag 480 ctaaaaccaa gttttgcgtt tcacttgtaa agttagcaat ctaataacaa aaagaaaaat 540 ccttactcat tgccattcaa ctgatttttt ttgtttattt tttttctttg aatgtatgca 600 ttgagttgct cgtgtaaact ttctgctaaa tcattatata cattgtcaat ggcaaataat 660 atatcttcct gtacaacttt gttgaccgcc aatcggtgga agaatctgct gcacaaaatc 720 atcaggaagt taacggtagt tgaattaaat atatccagta tttctttata caactttgaa 780 aagtccttat gaaattctct cttataaaga agctcgtcag gaatttgctc tacgcatttt 840 ataaaaaagt atgatgaaac acaagattct ctgtatttct gtaatagtaa tggaaggttt 900 cgtaacattg cttgctgttg gtttacgacc tcatcttcaa gtcttttacc tggcttcttc 960 gactagaggt ttagtaatat gaagctttaa ataacttact cttttgctaa tatgtgttgc 1020 aaaataatgg agatagatag aagaaaattc tatcactgcg ttgctcggta tacaggggtt 1080 taagacactg ttagtatctt ttgcatcaaa gcgatcataa agcaagagct ttgcaacatc 1140 ctcccaactg gcaagtaatt gtgagtttgt atgaatggaa tgcatgcttt cctcaattaa 1200 ttgctgccta tgattattca tatcatattc tcgtatgaaa tccgcatcat aaaagttatt 1260 ctcctgcgac tgatatacaa atttgtcatc gtctttcaca cgcgaaaaga tgtgatcgct 1320 gctatcacgg aaccaagatt caaatccttg ctcaagtatg aataataacg cattcatttt 1380 gaataggctt tcaaagctgg aaactaacaa tgggattttt tcacgcctta agagctttga 1440 taagctgatt gttgcagtct ttgcttcaca ataatttgcg tagcgttcat tagtatgggc 1500 aacgaggatt cgcattgtcg agattcgatt ctggggcttc ccgtcaaata tgcagctaga 1560 aacaatattg atacattttc cattcaacga tattttctcc atcagtttct cgcatgtctt 1620 gagggcaaca gatcgaacag aatcaatatc gtaccgacat atctccacaa ttcttaacga 1680 gaatctgtca agaaaatcaa ccacaaaatc ttgatctttt tcaggttcat gagaagaaag 1740 ataatctatt atttttaagg agatttttcg gatttgtgat tcctatacgt tcagttagta 1800 tttaaatgat acagcagtag cgattgttta tacacttact gcatcagata acccccagcc 1860 agaatgtcta atcaaatttc tgtttataag ataggtggga agcaattggc aacaatcata 1920 tagagcagta acacacacta tacgaatgct tgcacgtata tcatgaatcc ttgagaatag 1980 tacactagta aaaaggttag agtcgttaag aaaagtagta ttgccaacct atcacaaatg 2040 tcgtgaatca tgtcaatgaa cctagatgtt aagtctctca gtaccagaat ttccgcagtt 2100 tgatttgatt tttcggaaag tttgtttact ataaggcata agcatcgcat gatatcacag 2160 caaatagttg ttgcagtatg tctaacaagc atccaaggac ttgtcgtcat ggtaaaaatc 2220 caagcttttg tagtttccat gaatgagtct ccgaggaatg cgtcttccac gtaaacttta 2280 ctgatgaatt cgaccaaaaa aagctgaaaa cgaatacgca ccgttttagc ttctttagag 2340 ttagaagtat aaagataatc agtataagcg caagaagact agcgatatgt atggtaagta 2400 aatattacaa aaagatgatg cacacacctt ttgaaaactt gaacgattga cctgagacaa 2460 tgtttcagga attgaatcta cgtcctgtac atcaaagttc gtaacgaagg gttgacaacc 2520 agaggcctat gaattagttt acgtttcaaa ggaagagtaa acaaaacagc aaaagctaga 2580 aaacgtcgcg gatcattcct gctaaactta caactaatgc gaaatttata aaggtcagca 2640 tgaagtcagc gctattactt ttatagtctt caaaataatg ttgagaaagt tgctcgagcg 2700 gcatatctat atccaacagt ttgacttttc gtatgcttgt tagaatatat tatcgaagac 2760 tttttttctc ttataagcaa gcaaacttac gaaaaaattc ttgtggaaag gcataatcat 2820 gagaatttac gtgcatctct tcattcgtct ctatttcatt attttcttca ttctccgtca 2880 aagaaaattc atcttgtgtt ccccatttcc gctttttttc tgagggcgag gcacaaatgc 2940 tgacattctg taaacttgga ccttcatatt caacattttc aagctccacg ctttctaatt 3000 cagtaaggac ttcattgaga tgactgcttg catctgattc aaattcgaat ctcattgaaa 3060 tcactcaatt aattggtacg atggtggttg gttatggcaa agattaatct aacagaaacg 3120 atgggtttgt ttacgtgaca cgagtcgcgt cagtcagtca ttaattattt tgcagttcac 3180 atacaaccat tgcaatcaag tatataataa tttattaaag ttttactttt gaaacataaa 3240 gtaactaatt tatgaataag aacgcgtttt tactcggaat ttcgggcttt tccctgaccc 3300 cttttgagaa cccaccaact cctttttctc attagtagta gctcggtatt cctttgcaaa 3360 gtcctactcc aacttttggt taatactctt gttcgttggt ttcatttgag atttttagtt 3420 cttgtactgt tgtagtacta atctttctgg tcaatccaaa agattacttt cctcgaatcc 3480 ttcgttcaat agtatcttca tatatttggg tgtagagtca ttttttcgaa tttttagaag 3540 tcgaaaagca tctaaatttt taaggatctt ttccaaagag aagactaggg ttcctacctg 3600 agtaaaaggc agtttgaaaa ccgactttca tcgcatgtcc aaaactttct aaacaagtgt 3660 gtgctggttt actaatggac gtttcgactc aaacaagaca cgcaacatat tttcaagatg 3720 agaatcagct acaaaaggat cacatttatg tgaagaagaa aagtcacatc aagttaaata 3780 cgggtgttcg tgcacctttc aaggcagtag ataacatcaa tcaacaagat gaaccaacat 3840 tgattgaagg gaataatgaa tcctccatct cttcgtccac tggcgacact tttgaagagg 3900 attttgcata ccaggacaaa gtcgagatag aggaacggtc aattcgctcc actcctaagt 3960 ctattggaga tgatgatttg gaaaaccgtg agggcagctt tgacgcacct gaaggaattc 4020 ttacacacgg gaagcataga ctaccaacaa ttcccgagtg gaccaaggaa gatttagccg 4080 ccctgtctga agctgctgct cgattacaag ctaacccatc gcctgaggat atagaaactg 4140 atccatccat ggtaccagac tatgatcctg agatatttca ctacatgcaa tctttggaaa 4200 ggaagctggc tccacctcct aattacatgt cagttcagca agagattgac tgggttacaa 4260 gacatatgct tgttgattgg attgtgcaag ttcaaataca ttttcgttta cttcctgaga 4320 cattattttt ggcggtaaac cttatcgacc ggtttctttc cataaaagtc gtatctttgc 4380 aaaaagtcca gttggtaggt ttatcagctt tgctgattgc ctgtaagtat gaagagatac 4440 accctccaag catctacaac tttgcgcatg ttgtccaagg gatcttcacc gttgacgaaa 4500 tcattagagc cgagcgctat atgctgatgc ttttggattt tgacattagt tggccagggc 4560 ccatgtcgtt tttgcgtcgt ataagtcgag ctgattctta cgatc 4605 //