ID   SPCC1742   standard; DNA; FUN; 800 BP.
XX
AC   AL353867;
XX
SV   AL353867.2
XX
DT   25-APR-2000 (Rel. 63, Created)
DT   04-MAY-2000 (Rel. 63, Last updated, Version 2)
XX
DE   S.pombe chromosome III cosmid c1742.
XX
KW   Threonine-rich repeat protein.
XX
OS   Schizosaccharomyces pombe (fission yeast)
OC   Eukaryota; Fungi; Ascomycota; Schizosaccharomycetes;
OC   Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces.
XX
RN   [1]
RP   1-800
RA   Barrell B.G., Rajandream M.A., Saunders D., Wood V., Harris D.;
RT   ;
RL   Submitted (25-APR-2000) to the EMBL/GenBank/DDBJ databases.
RL   Schizosaccharomyces pombe chromosome I sequencing project, Sanger Centre,
RL   Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA E-mail:
RL   barrell@sanger.ac.uk
XX
DR   SPTREMBL; Q9P6S0; Q9P6S0.
XX
CC   Notes:
CC   Details of yeast sequencing at the Sanger Centre are available on
CC   the World Wide Web.
CC   (URL, http://www.sanger.ac.uk/Projects/S_pombe/)
CC   Protein coding regions (CDS) have been predicted with the help
CC   of computer analysis using the Genefinder program in PomBase
CC   (an ACEDB database) with additional predictions for the
CC   branch-acceptor sites supplied by the program Sp3splice.
CC   CAUTION: It is possible that for any individual CDS we may have
CC   underestimated or overestimated the number of introns/exons or
CC   we may not have chosen the correct splice donor/acceptor sites.
CC   CDS are numbered using the following system eg SPAC5H10.01c.
CC   SP (S. pombe), A (chromosome 1), c5H10 (cosmid name),
CC   .01 (first CDS), c (complementary strand).
CC   The more significant matches with motifs in the PROSITE
CC   database are also included but some of these may be fortuitous.
CC   The length in codons is given for each CDS.
CC   IMPORTANT: This sequence MAY NOT be the entire insert of
CC   the sequenced clone.  It may be shorter because we only
CC   sequence overlapping sections once, or longer, because we
CC   arrange for a small overlap between neighbouring submissions.
CC   Cosmid c1742 is overlapped at its 3' end by cosmid SPCC1795.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..800
FT                   /chromosome="III"
FT                   /db_xref="taxon:4896"
FT                   /organism="Schizosaccharomyces pombe"
FT                   /strain="972h-"
FT                   /clone="cosmid c1742"
FT                   /map="III"
FT   CDS             complement(1..800)
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q9P6S0"
FT                   /label=SPCC1742.01
FT                   /note="SPCC1742.01,"
FT                   /partial
FT                   /gene="SPCC1742.01"
FT                   /gene="SPCC1795.13"
FT                   /product="hypothetical protein with large repeated
FT                   threonine-rich region"
FT                   /protein_id="CAB89008.1"
FT                   /translation="SGSTSTSCPPPTTILIVTVPTTTTTTTVGYPGSVTTTLTGTPSNG
FT                   TVIDTVEVPTTTNYGYTTITTGYTGSTTLTTTVPHSGNETGPTTVYVETPYPTTVTTTT
FT                   TVGYPGSVTTTLTGAPSNGTVIDTVEVPTTTNYGYTTVTTGYTGSTTLTTTVPHSGNET
FT                   GPTTVYVETPYPTTVTTTTTVGYPGSVTTTLTGAPSNGTVIDTVEVPTTTNYGYTTVTT
FT                   GYTGSTTLTTTVPHSGNETGPTTVYVETPYPTTVTTTTTVGYPGS"
FT   misc_feature    703..800
FT                   /note="nominal overlap with cosmid SPCC1795, EM:AL022598 S.
FT                   pombe chromosome 3"
FT   conflict        711
FT                   /note="This base was a G in this cosmid but was changed to
FT                   a G to agree with cosmid c1795 to allow contiguation"
FT                   /citation=[1]
XX
SQ   Sequence 800 BP; 246 A; 130 C; 223 G; 201 T; 0 other;
     gatccaggat atccaacagt agtggtggta gtgacagttg tgggataagg agtctccaca        60
     taaactgtag taggtccagt ctcattacca ctgtgaggaa cagtagtggt aagagtagtg       120
     gatccagtat aaccagtggt aacagtggtg taaccatagt tagtagtagt gggaacctca       180
     acagtatcaa taacagtacc attgctagga gctccagtca aagtagtagt gacggatcca       240
     ggatatccaa cagtagtggt ggtagtgaca gttgtgggat aaggagtctc cacataaact       300
     gtagtaggtc cagtctcatt accactgtga ggaacagtag tggtaagagt agtggatcca       360
     gtataaccag tggtaacagt ggtgtaacca tagttagtag tagtgggaac ctcaacagta       420
     tcaataacag taccattgct aggagctcca gtcaaagtag tagtgacgga tccaggatat       480
     ccaacagtag tggtggtagt gacagttgtg ggataaggag tctccacata aactgtagta       540
     ggtccagtct cattaccact gtgaggaaca gtagtggtaa gagtagtgga tccagtataa       600
     ccagtggtaa tagtggtgta accatagtta gtagtagtgg gaacctcaac agtatcaata       660
     acagtaccat tgctaggagt tccagtcaag gtagtagtga cggatccagg atatccaaca       720
     gtagttgttg tggttgtggt agggactgta acaataagaa ttgttgttgg agggggacaa       780
     ctagtacttg ttgaaccaga                                                   800
//