ID SPAP11E10 standard; DNA; FUN; 3851 BP. XX AC AL512493; XX SV AL512493.1 XX DT 04-JAN-2001 (Rel. 66, Created) DT 04-JAN-2001 (Rel. 66, Last updated, Version 1) XX DE S.pombe chromosome I p1 p11E10. XX KW Mu-crystallin-like; ornithine cyclodeaminase; KW serine/threonine repeat protein. XX OS Schizosaccharomyces pombe (fission yeast) OC Eukaryota; Fungi; Ascomycota; Schizosaccharomycetes; OC Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces. XX RN [1] RP 1-3851 RA Warren T., Harris D., Wood V., Rajandream M.A., Barrell B.G.; RT ; RL Submitted (03-JAN-2001) to the EMBL/GenBank/DDBJ databases. RL European Schizosaccharomyces genome sequencing project, Sanger Centre, The RL Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SA, E-mail: RL barrell@sanger.ac.uk XX DR SPTREMBL; Q9HDY9; Q9HDY9. DR SPTREMBL; Q9HDZ0; Q9HDZ0. XX CC Notes: CC Details of yeast sequencing at the Sanger Centre are available on CC the World Wide Web. CC (URL, http://www.sanger.ac.uk/Projects/S_pombe/) CC During 1995 to 1996 about 66% of S. pombe chromosome 1 was sequenced CC by the Sanger Centre. The sequencing of the S. pombe genome is now CC being continued with funding from The European Commission. CC Fourteen European sequencing laboratories, including the Sanger Centre, CC are participating in the project. CC Protein coding regions (CDS) have been predicted with the help CC of computer analysis using the Genefinder program in PomBase CC (an ACEDB database) with additional predictions for the CC branch-acceptor sites supplied by the program Sp3splice. CC CAUTION: It is possible that for any individual CDS we may have CC underestimated or overestimated the number of introns/exons or CC we may not have chosen the correct splice donor/acceptor sites. CC CDS are numbered using the following system eg SPBC25H2.01c. CC SP (S. pombe), B (chromosome 2), c25H2 (cosmid name), CC .01 (first CDS), c (complementary strand). CC The more significant matches with motifs in the PROSITE CC database are also included but some of these may be fortuitous. CC The length in codons is given for each CDS. CC IMPORTANT: This sequence MAY NOT be the entire insert of CC the sequenced clone. It may be shorter because we only CC sequence overlapping sections once, or longer, because we CC arrange for a small overlap between neighbouring submissions. CC p1 p11E10 overlapped at the 5' end by cosmid c1399 and at the 3' CC end by BAC pB1A10. XX FH Key Location/Qualifiers FH FT source 1..3851 FT /chromosome="I" FT /db_xref="taxon:4896" FT /organism="Schizosaccharomyces pombe" FT /strain="972h-" FT /clone="p1 p11E10" FT /map="IL" FT misc_feature 1..204 FT /note="nominal overlap with c1399 S. pombe chromosome 1" FT CDS 1066..2058 FT /db_xref="SPTREMBL:Q9HDZ0" FT /label=SPAP11E10.01 FT /note="SPAP11E10.01, len:331, SIMILARITY:Arabidopsis FT thaliana, BAB10429, similarity to ornithine FT cyclodeaminase., (325 aa), fasta scores: opt: 608, E():0, FT (35.8% identity in 327 aa)" FT /gene="SPAP11E10.01" FT /product="putative ornithine cyclodeaminase; FT Mu-crystallin-like" FT /protein_id="CAC19749.1" FT /translation="MSGSCQFLSRETLSSSLGWIPLINALREIFTENVVCPTRLHYPID FT EDNPSSTANNILLIMPCWIPGKFLGVKQVNVFPENTKHGLPSLSSHYLLSDATTGCHLA FT QLDGNELTSRRTAAASALASSYLSKEDSTSLLIIGSGKVAEKLIHAHCSVRPIRSVRIW FT NHRFESAKSLASRASKELPSIQIDAVPIQNLENAVKCSDIISSATLSKKPIIVGSWINP FT GTHIDLVGGFTPHMHEADSKCIQISNVFVDTRKGALHEAGDLLTPIKEGLFSPNEVIAD FT LFDLCNNKHSGRSQLKNPAEAITLFKSVGDSREDLAAASLAYKVHNKSS" FT CDS complement(2153..3851) FT /codon_start=2 FT /db_xref="SPTREMBL:Q9HDY9" FT /label=SPAP11E10.02c FT /note="SPAP11E10.02c, " FT /partial FT /gene="SPAP11E10.02c" FT /product="hypothetical serine/threonine repeat containing FT protein" FT /protein_id="CAC19750.1" FT /translation="TENFTSASSSLSLTNAKSSLSTPSTTIPTSNSSVSLQTSSSLIIS FT SPIISSSLTATSTSTPALTHSITPSNTSYTSSLIPSSSTDYSSSLITVCSNVTSEISST FT SLASLISTLTSQQISSNKSSEFVGQTTTEYTTSGSVGFTTTLATQSGSVPGTVLVDVPT FT PSWITETVTSGSVGFTTTIATPIGTTAGTVLVDIPTPSWVTETVTSGSIGFTTTIATPI FT GSTAGTVLVDVPTPSWVTETVTSGSVGFTTTIATPIGSTAGTVLVDIPTPSWVTETVTS FT GSVGFTTTIATPVGTTAGTVLVDIPTPSWVTETVTSGSVGFTTTIATPVGTTAGTVVVD FT VPTPSWVTETVTSGSVGFTTTIATPIGSTAGTVLVDIPTPSWVTETVTSGSVGFTTTIA FT TPVGTTAGTVLVDIPTPSWVTETVTSGSVGFTTTIATPIGTTAGTVLVDIPTPSWVTET FT VTSGSVGFTTTIATPVGTTAGTVLVDIPTPSWVTETVTSGSVGFTTTIATPIGTTAGTV FT LVDIPQQHATTTTTTTFDGFSGYTSSYTGSITETIVIGTPHHSVVDVS" FT misc_feature 3730..3851 FT /note="nominal overlap with pB1A10" XX SQ Sequence 3851 BP; 1220 A; 659 C; 840 G; 1132 T; 0 other; ccgtttataa accatgtatt ttccgactag tgaatttagt tggattgata taaataatta 60 aaagcgataa tatttgtata ttgttataga agaaacccaa aaatcgtagt atgaaatttg 120 cagtatttta tttgctaaga ggaaattaag cagttaaaga agcgaggttt tctttcaagc 180 gtgaatccgt gtaacgttga tttatttact tacttgagaa tactgacttt aaagcagctt 240 gctgtgttaa gcttccaatg tttacaaaag acacatttca gcatccgttg ggtatatact 300 atgaaataaa acgttcgacg tgggttataa agcaatgtat gttgcattga atgatctttc 360 taattgcagc acccttgttg ataaataaga aaaagaaatc taattataat cttaactaaa 420 aatgtgaact gcgaaaattc ttgctacgat agcattaatc ggttagcaca ttttatagcg 480 aaaatgtatc gtattgtagt tgggcgaaag gccgtggaca tttttattac ttcgttcgtc 540 taaggtaatc tttgctcgaa ataccgtgct atcagtattt gatgcgatca atctggctag 600 tttttcttga tacatacatt tattagtaca cactctggta ttgctaagct tggtaaaatt 660 ataccttcaa ataagtttct ggtgaaacac ctatcgtcgt ttacaccatt atctggagtt 720 tgaaatacag tttctaattg aaagtcacaa aggactaacg aaatacttgt cttactttct 780 gttttgagaa tacatccttt actattcttg atcgcttatt tatcaattga cttcttttca 840 tcttcgatta gagaaggtat cattcgtatt ataatcaatt ttccataaac tcacaaaagt 900 tgaaaattag ttctcagtat ttaatactgg tgatcgttaa tagttttgct taaaaaagtg 960 ttcttttgct aacatatttc tttttggaat ttataaagat caagttgtat aactttaccc 1020 aacgttttta tttagaagat aaattgaaaa aaaaaataaa taattatgtc gggttcctgt 1080 caatttcttt cgagagaaac acttagctca tcgttgggtt ggattcctct tataaatgcc 1140 ttacgagaaa tatttactga gaatgtcgtc tgtccgacga gattacatta cccaattgat 1200 gaagataatc ctagcagtac tgcgaacaac atccttttga ttatgccttg ttggattccg 1260 ggaaaatttc tcggtgtaaa acaagtaaac gtattccctg aaaataccaa acacggtctt 1320 ccgagccttt ccagtcacta tctattgagt gatgctacaa caggttgcca tcttgctcag 1380 cttgatggaa atgaacttac ttcacgacga acagctgctg cctctgcact agcttcttct 1440 tacttatcca aggaagattc aacttcactt cttataatag gatcaggcaa ggtagcagag 1500 aagctaattc acgcacattg ttctgtaaga ccaatccgca gtgtacgaat ttggaaccat 1560 cgctttgaat cagcaaaatc tttggcaagc cgagcctcaa aagaactccc gtctattcag 1620 atagatgctg ttcctataca aaacttagag aatgctgtta aatgcagtga cataatatcc 1680 tcagctacat tgagcaaaaa gccaataatt gtaggttcat ggattaaccc tggcacacat 1740 attgaccttg ttggagggtt cacaccgcat atgcacgaag cagattcaaa atgtatacaa 1800 atatctaatg tttttgtaga tacgaggaaa ggtgctttgc atgaagccgg tgatctgcta 1860 actccaatta aagaaggatt gttctctcca aatgaagtaa tagccgatct ttttgatcta 1920 tgcaacaata aacatagcgg acgctcacaa ctgaaaaatc ctgctgaagc gattacattg 1980 tttaaatctg ttggtgattc gagggaagat cttgcagctg cttccttggc ttacaaagta 2040 cacaataaat caagctaatc gctgtgataa agcgataaat taacaataaa gatttaagaa 2100 aataacacga ttttaattaa tatgtaaaat aaatataaaa cattaacttt atctaagaaa 2160 catcaactac agaatggtga ggtgttccaa ttacaatggt ttctgtgatt gaaccagtgt 2220 atgaactggt atatccacta aagccatcaa acgttgttgt agttgtagta gtagcgtgtt 2280 gttggggaat atcaacgaga accgttccag cagtggttcc aatgggagta gcaatggttg 2340 tggtgaatcc gacagatcca gatgtaacag tttcagttac ccaagatggt gtaggaatat 2400 cgactaggac agttccagca gtggttccaa cgggggtagc aatggttgtg gtgaacccaa 2460 cagatccaga tgtaacagtt tcagttaccc aagatggtgt aggaatatca acgagaaccg 2520 ttccagcagt ggttccaatg ggagtagcaa tggttgtggt gaatccgaca gatccagatg 2580 taacagtttc agttacccaa gatggtgtag gaatatcgac taggacagtt ccagcagtgg 2640 ttccaacggg ggtagcaatg gttgtggtga acccaacaga tccagatgta acagtttcag 2700 ttacccaaga tggtgtagga atatcaacga gaaccgttcc agcagtggat ccaatgggag 2760 tagcaatggt tgtggtgaat ccaacagatc cagatgtaac agtttcagtt acccaggatg 2820 gtgttgggac gtctacaact actgtcccgg cagtggttcc aacgggagta gcaatagtgg 2880 tagtgaatcc aacagatcca gatgtgacgg tttcagttac ccaagatggt gtaggaatat 2940 cgactaggac agttccagca gtggttccaa cgggggtagc aatggttgtg gtgaacccaa 3000 cagatccaga tgtaacagtt tcagttaccc aagatggtgt aggaatatca acgagaaccg 3060 ttccagcagt ggatccaatg ggagtagcaa tggttgtggt gaatccaaca gatccagatg 3120 taacagtttc agttacccag gatggtgtag ggacgtctac aagtacggta ccagcagtgg 3180 atccaatggg agtagcaata gtggtagtga atccaataga tccagatgta acggtttcag 3240 ttacccaaga tggtgtagga atatcgacta ggacagttcc agcagtggtt ccaatgggag 3300 tagcaatggt tgtggtgaac ccaacagatc cagatgtaac ggtttcagtt atccaggatg 3360 gtgtagggac gtcaacaagt acggtaccag gtacactacc agactgcgta gctaacgtag 3420 tggtaaatcc aacggaacca gaagtagtat attctgtagt tgtttgacca acaaattcgg 3480 aagacttatt tgagcttatt tgctgactag ttaaggtgga gattaaggaa gctaaagaag 3540 tagaagaaat ttcgctagtg acattgctgc aaacagtaat taaactacta gaataatctg 3600 tgctgctaga agggattaga cttgaagtgt aagaagtatt ggaaggagtg attgaatgcg 3660 ttagcgcagg tgttgaagta ctagtcgctg taagtgatga agatataatc ggactagaaa 3720 ttatcagact tgaagaagtc tgcaaagaaa ccgatgagtt tgaagtaggt atcgtagtcg 3780 atggagtgct caatgatgat ttagcattcg ttaagcttaa ggaagaagaa gcagaggtaa 3840 agttttctgt g 3851 //